Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm26419-201ENSMUST00000104272 133 ntBASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm12460-201ENSMUST00000117147 357 ntBASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm12331-201ENSMUST00000119927 622 ntBASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm25047-201ENSMUST00000122667 104 ntBASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 A630023P12Rik-202ENSMUST00000141420 495 ntTSL 2 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm25989-201ENSMUST00000158761 133 ntBASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC6.84□□□□□ -1.31
Col8a1Q00780 U2af1l4-204ENSMUST00000163464 651 ntTSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Traj54-201ENSMUST00000165071 54 ntBASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm15251-201ENSMUST00000177947 883 ntBASIC6.84□□□□□ -1.31
Col8a1Q00780 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm20111-201ENSMUST00000184830 319 ntBASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm38051-201ENSMUST00000193740 433 ntBASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm42804-201ENSMUST00000199701 178 ntBASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm5981-201ENSMUST00000199912 487 ntBASIC6.84□□□□□ -1.31
Col8a1Q00780 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC6.84□□□□□ -1.31
Col8a1Q00780 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC6.84□□□□□ -1.31
Col8a1Q00780 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC6.84□□□□□ -1.31
Col8a1Q00780 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC6.84□□□□□ -1.31
Col8a1Q00780 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm9280-201ENSMUST00000223155 517 ntBASIC6.84□□□□□ -1.31
Col8a1Q00780 CT010472.1-201ENSMUST00000224000 704 ntBASIC6.84□□□□□ -1.31
Col8a1Q00780 CT009527.2-201ENSMUST00000225386 606 ntBASIC6.84□□□□□ -1.31
Col8a1Q00780 AC132833.4-201ENSMUST00000228313 203 ntBASIC6.84□□□□□ -1.31
Col8a1Q00780 Pudp-201ENSMUST00000056460 1044 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm26203-201ENSMUST00000082911 114 ntBASIC6.84□□□□□ -1.31
Col8a1Q00780 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Mir146b-201ENSMUST00000093619 109 ntBASIC6.84□□□□□ -1.31
Col8a1Q00780 Ptpro-207ENSMUST00000203914 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Ralgps2-204ENSMUST00000172057 6863 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 E130018O15Rik-201ENSMUST00000069741 3776 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 L1td1-202ENSMUST00000154279 2942 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 D130007C19Rik-201ENSMUST00000067277 1505 ntBASIC6.84□□□□□ -1.31
Col8a1Q00780 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Foxp3-202ENSMUST00000115738 3681 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Tvp23a-201ENSMUST00000051118 3315 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm7694-201ENSMUST00000179801 3827 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
Col8a1Q00780 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Col8a1Q00780 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC6.84□□□□□ -1.32
Col8a1Q00780 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Col8a1Q00780 Gm19085-201ENSMUST00000188924 2162 ntBASIC6.84□□□□□ -1.32
Col8a1Q00780 Trpv2-201ENSMUST00000018651 2909 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Slc12a8-201ENSMUST00000059056 3166 ntAPPRIS P2 TSL 2 BASIC6.83□□□□□ -1.32
Col8a1Q00780 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms