Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Tpm1P58771 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC8.25□□□□□ -1.09
Tpm1P58771 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Tpm1P58771 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Tpm1P58771 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Tpm1P58771 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Tpm1P58771 Hist1h4f-201ENSMUST00000102971 391 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Tpm1P58771 Hist1h4h-201ENSMUST00000102972 470 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Tpm1P58771 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC8.25□□□□□ -1.09
Tpm1P58771 Olfr400-ps1-201ENSMUST00000118094 955 ntBASIC8.25□□□□□ -1.09
Tpm1P58771 Gm11997-201ENSMUST00000118697 313 ntBASIC8.25□□□□□ -1.09
Tpm1P58771 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Tpm1P58771 Gm22224-201ENSMUST00000157357 93 ntBASIC8.25□□□□□ -1.09
Tpm1P58771 4921523L03Rik-201ENSMUST00000175729 1186 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Tpm1P58771 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC8.25□□□□□ -1.09
Tpm1P58771 Gm28281-201ENSMUST00000185658 187 ntBASIC8.25□□□□□ -1.09
Tpm1P58771 Gm29041-201ENSMUST00000189199 380 ntBASIC8.25□□□□□ -1.09
Tpm1P58771 1700124L16Rik-203ENSMUST00000190077 1110 ntBASIC8.25□□□□□ -1.09
Tpm1P58771 Gm31243-201ENSMUST00000197498 632 ntTSL 2 BASIC8.25□□□□□ -1.09
Tpm1P58771 Gm43008-201ENSMUST00000202346 286 ntBASIC8.25□□□□□ -1.09
Tpm1P58771 Gm18469-201ENSMUST00000208850 439 ntBASIC8.25□□□□□ -1.09
Tpm1P58771 Gm44743-201ENSMUST00000209062 386 ntBASIC8.25□□□□□ -1.09
Tpm1P58771 Gm4536-201ENSMUST00000209157 542 ntBASIC8.25□□□□□ -1.09
Tpm1P58771 Gm45842-201ENSMUST00000211876 753 ntTSL 3 BASIC8.25□□□□□ -1.09
Tpm1P58771 Rasgrf1-201ENSMUST00000034909 853 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Tpm1P58771 Olfr304-201ENSMUST00000077210 1002 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Tpm1P58771 Gm25129-201ENSMUST00000082651 133 ntBASIC8.25□□□□□ -1.09
Tpm1P58771 Gm6640-201ENSMUST00000120629 1587 ntBASIC8.25□□□□□ -1.09
Tpm1P58771 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Tpm1P58771 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Tpm1P58771 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Tpm1P58771 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC8.25□□□□□ -1.09
Tpm1P58771 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Tpm1P58771 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Tpm1P58771 AC112680.1-201ENSMUST00000215435 1349 ntBASIC8.25□□□□□ -1.09
Tpm1P58771 AC125487.1-201ENSMUST00000217888 1300 ntBASIC8.25□□□□□ -1.09
Tpm1P58771 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Tpm1P58771 AC122024.1-201ENSMUST00000219276 4850 ntBASIC8.25□□□□□ -1.09
Tpm1P58771 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Tpm1P58771 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Tpm1P58771 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Tpm1P58771 Lgals9-202ENSMUST00000108268 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Tpm1P58771 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Tpm1P58771 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Tpm1P58771 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Tpm1P58771 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC8.24□□□□□ -1.09
Tpm1P58771 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Tpm1P58771 Gm45528-201ENSMUST00000209854 3145 ntBASIC8.24□□□□□ -1.09
Tpm1P58771 Gm37283-201ENSMUST00000193111 1571 ntBASIC8.24□□□□□ -1.09
Tpm1P58771 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC8.24□□□□□ -1.09
Tpm1P58771 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
Tpm1P58771 Rnase13-201ENSMUST00000089771 1412 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Tpm1P58771 Znhit3-201ENSMUST00000103195 998 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Tpm1P58771 Gm2237-201ENSMUST00000112595 471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Tpm1P58771 Gm13573-201ENSMUST00000116410 631 ntBASIC8.24□□□□□ -1.09
Tpm1P58771 Gm13229-201ENSMUST00000118238 340 ntBASIC8.24□□□□□ -1.09
Tpm1P58771 Gm11245-201ENSMUST00000119419 1037 ntBASIC8.24□□□□□ -1.09
Tpm1P58771 AA623943-201ENSMUST00000121794 354 ntBASIC8.24□□□□□ -1.09
Tpm1P58771 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC8.24□□□□□ -1.09
Tpm1P58771 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Tpm1P58771 Gm24063-201ENSMUST00000157491 105 ntBASIC8.24□□□□□ -1.09
Tpm1P58771 Gm22262-201ENSMUST00000158713 86 ntBASIC8.24□□□□□ -1.09
Tpm1P58771 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Tpm1P58771 Gm20529-201ENSMUST00000173683 203 ntTSL 5 BASIC8.24□□□□□ -1.09
Tpm1P58771 Gm20406-201ENSMUST00000173993 423 ntTSL 3 BASIC8.24□□□□□ -1.09
Tpm1P58771 Gm6799-201ENSMUST00000186919 573 ntBASIC8.24□□□□□ -1.09
Tpm1P58771 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC8.24□□□□□ -1.09
Tpm1P58771 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC8.24□□□□□ -1.09
Tpm1P58771 Gm37561-201ENSMUST00000195221 368 ntTSL 5 BASIC8.24□□□□□ -1.09
Tpm1P58771 Gm5723-201ENSMUST00000203096 432 ntBASIC8.24□□□□□ -1.09
Tpm1P58771 Ceacam-ps1-201ENSMUST00000205380 794 ntTSL 2 BASIC8.24□□□□□ -1.09
Tpm1P58771 Gm45155-201ENSMUST00000207365 596 ntTSL 2 BASIC8.24□□□□□ -1.09
Tpm1P58771 Gm32710-201ENSMUST00000210677 618 ntTSL 5 BASIC8.24□□□□□ -1.09
Tpm1P58771 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC8.24□□□□□ -1.09
Tpm1P58771 AC163041.2-201ENSMUST00000223082 573 ntBASIC8.24□□□□□ -1.09
Tpm1P58771 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC8.24□□□□□ -1.09
Tpm1P58771 AC158954.1-201ENSMUST00000228272 1006 ntBASIC8.24□□□□□ -1.09
Tpm1P58771 Olfr518-201ENSMUST00000059617 1002 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Tpm1P58771 Olfr1055-201ENSMUST00000099894 1182 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Tpm1P58771 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Tpm1P58771 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Tpm1P58771 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Tpm1P58771 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Tpm1P58771 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Tpm1P58771 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Tpm1P58771 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Tpm1P58771 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC8.24□□□□□ -1.09
Tpm1P58771 Gm44436-201ENSMUST00000204200 1494 ntBASIC8.24□□□□□ -1.09
Tpm1P58771 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
Tpm1P58771 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Tpm1P58771 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Tpm1P58771 Gm6819-201ENSMUST00000185325 1891 ntBASIC8.23□□□□□ -1.09
Tpm1P58771 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Tpm1P58771 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC8.23□□□□□ -1.09
Tpm1P58771 AC158988.1-201ENSMUST00000226731 2624 ntBASIC8.23□□□□□ -1.09
Tpm1P58771 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Tpm1P58771 1700095J07Rik-201ENSMUST00000128017 1405 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Tpm1P58771 Gm15624-201ENSMUST00000145420 1405 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Tpm1P58771 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC8.23□□□□□ -1.09
Tpm1P58771 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC8.23□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms