Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
NcanP55066 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
NcanP55066 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
NcanP55066 Gm5601-201ENSMUST00000118909 972 ntBASIC8.04□□□□□ -1.12
NcanP55066 Gm11445-201ENSMUST00000119101 532 ntBASIC8.04□□□□□ -1.12
NcanP55066 Gm15712-201ENSMUST00000120369 1156 ntBASIC8.04□□□□□ -1.12
NcanP55066 Gm8604-201ENSMUST00000183150 965 ntBASIC8.04□□□□□ -1.12
NcanP55066 Gm27960-201ENSMUST00000183445 184 ntBASIC8.04□□□□□ -1.12
NcanP55066 Gm28586-201ENSMUST00000189857 456 ntBASIC8.04□□□□□ -1.12
NcanP55066 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC8.04□□□□□ -1.12
NcanP55066 Gm43553-201ENSMUST00000200900 685 ntBASIC8.04□□□□□ -1.12
NcanP55066 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
NcanP55066 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC8.04□□□□□ -1.12
NcanP55066 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
NcanP55066 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC8.04□□□□□ -1.12
NcanP55066 AC153152.2-201ENSMUST00000223165 959 ntBASIC8.04□□□□□ -1.12
NcanP55066 A1cf-203ENSMUST00000224400 1204 ntBASIC8.04□□□□□ -1.12
NcanP55066 AC135086.1-201ENSMUST00000228621 817 ntBASIC8.04□□□□□ -1.12
NcanP55066 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC8.04□□□□□ -1.12
NcanP55066 Zfp865-202ENSMUST00000076791 1129 ntBASIC8.04□□□□□ -1.12
NcanP55066 Celf2-221ENSMUST00000182706 2525 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
NcanP55066 Adgrl2-213ENSMUST00000199059 4637 ntTSL 5 BASIC8.04□□□□□ -1.12
NcanP55066 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
NcanP55066 Gm28469-201ENSMUST00000186374 2166 ntTSL 5 BASIC8.04□□□□□ -1.12
NcanP55066 Gm28134-201ENSMUST00000188690 2166 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
NcanP55066 Gm37075-201ENSMUST00000191888 2166 ntTSL 5 BASIC8.04□□□□□ -1.12
NcanP55066 Gm37574-201ENSMUST00000194264 2166 ntTSL 5 BASIC8.04□□□□□ -1.12
NcanP55066 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC8.04□□□□□ -1.12
NcanP55066 Adh6a-201ENSMUST00000013455 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
NcanP55066 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
NcanP55066 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
NcanP55066 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
NcanP55066 Ankrd55-201ENSMUST00000022275 2412 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
NcanP55066 Trcg1-201ENSMUST00000093837 2701 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
NcanP55066 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
NcanP55066 Ctbp2-214ENSMUST00000169570 3604 ntTSL 5 BASIC8.03□□□□□ -1.12
NcanP55066 Kat6b-209ENSMUST00000182964 7699 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
NcanP55066 Gm38099-201ENSMUST00000193280 3170 ntBASIC8.03□□□□□ -1.12
NcanP55066 Gm11242-201ENSMUST00000120103 2457 ntBASIC8.03□□□□□ -1.12
NcanP55066 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
NcanP55066 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
NcanP55066 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
NcanP55066 Gm21560-201ENSMUST00000168480 2066 ntAPPRIS P5 TSL 5 BASIC8.03□□□□□ -1.12
NcanP55066 Kansl3-204ENSMUST00000185912 4527 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
NcanP55066 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
NcanP55066 Gm26417-201ENSMUST00000104274 135 ntBASIC8.03□□□□□ -1.12
NcanP55066 Gm2178-201ENSMUST00000104927 357 ntBASIC8.03□□□□□ -1.12
NcanP55066 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
NcanP55066 Gm13400-201ENSMUST00000117436 380 ntBASIC8.03□□□□□ -1.12
NcanP55066 Gm12321-201ENSMUST00000121485 804 ntBASIC8.03□□□□□ -1.12
NcanP55066 Gm15164-201ENSMUST00000122203 271 ntBASIC8.03□□□□□ -1.12
NcanP55066 Gm26480-201ENSMUST00000122619 297 ntBASIC8.03□□□□□ -1.12
NcanP55066 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC8.03□□□□□ -1.12
NcanP55066 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC8.03□□□□□ -1.12
NcanP55066 Gm7152-201ENSMUST00000163570 605 ntBASIC8.03□□□□□ -1.12
NcanP55066 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC8.03□□□□□ -1.12
NcanP55066 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC8.03□□□□□ -1.12
NcanP55066 Gm44896-201ENSMUST00000206190 772 ntBASIC8.03□□□□□ -1.12
NcanP55066 Gm44861-201ENSMUST00000208325 1220 ntBASIC8.03□□□□□ -1.12
NcanP55066 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC8.03□□□□□ -1.12
NcanP55066 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC8.03□□□□□ -1.12
NcanP55066 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC8.03□□□□□ -1.12
NcanP55066 Vmn1r41-205ENSMUST00000227630 827 ntBASIC8.03□□□□□ -1.12
NcanP55066 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
NcanP55066 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
NcanP55066 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
NcanP55066 Gm42678-201ENSMUST00000197163 2221 ntBASIC8.03□□□□□ -1.12
NcanP55066 Cep112-216ENSMUST00000182729 2850 ntTSL 5 BASIC8.03□□□□□ -1.12
NcanP55066 Gm42811-201ENSMUST00000201951 2768 ntBASIC8.03□□□□□ -1.12
NcanP55066 Stag1-201ENSMUST00000041418 5909 ntTSL 5 BASIC8.03□□□□□ -1.12
NcanP55066 Srp72-201ENSMUST00000101087 3625 ntAPPRIS P2 TSL 2 BASIC8.03□□□□□ -1.12
NcanP55066 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC8.03□□□□□ -1.12
NcanP55066 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
NcanP55066 Gm13110-201ENSMUST00000138077 3414 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
NcanP55066 Gm37289-201ENSMUST00000195409 1402 ntBASIC8.03□□□□□ -1.12
NcanP55066 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
NcanP55066 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
NcanP55066 Prdm16-204ENSMUST00000105636 8426 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
NcanP55066 Prdm16-202ENSMUST00000070313 8429 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
NcanP55066 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
NcanP55066 Herc3-202ENSMUST00000041401 4731 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
NcanP55066 Otoa-201ENSMUST00000047025 3773 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
NcanP55066 Gm45634-201ENSMUST00000209736 1990 ntBASIC8.02□□□□□ -1.12
NcanP55066 Tro-205ENSMUST00000151403 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.12
NcanP55066 Tbc1d14-215ENSMUST00000146430 4582 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
NcanP55066 Tbc1d14-201ENSMUST00000031094 4590 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
NcanP55066 Fam217a-201ENSMUST00000021851 2402 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
NcanP55066 6030443J06Rik-203ENSMUST00000181764 4299 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
NcanP55066 Nav1-202ENSMUST00000067414 13117 ntAPPRIS P2 TSL 5 BASIC8.02□□□□□ -1.13
NcanP55066 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC8.02□□□□□ -1.13
NcanP55066 Gm5454-201ENSMUST00000052030 1453 ntBASIC8.02□□□□□ -1.13
NcanP55066 Slco5a1-207ENSMUST00000188454 8463 ntAPPRIS P2 TSL 5 BASIC8.02□□□□□ -1.13
NcanP55066 Abce1-201ENSMUST00000080536 3793 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
NcanP55066 Gm10600-201ENSMUST00000117202 2047 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
NcanP55066 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
NcanP55066 Slc39a9-201ENSMUST00000085245 5201 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
NcanP55066 Gm24789-201ENSMUST00000104282 131 ntBASIC8.02□□□□□ -1.13
NcanP55066 Gm14375-201ENSMUST00000119490 855 ntBASIC8.02□□□□□ -1.13
NcanP55066 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC8.02□□□□□ -1.13
NcanP55066 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 125.3 ms