Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Chd1P40201 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd1P40201 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Chd1P40201 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Chd1P40201 A830036E02Rik-204ENSMUST00000139095 3413 ntTSL 2 BASIC11.09□□□□□ -0.63
Chd1P40201 Utp14a-201ENSMUST00000080713 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd1P40201 Utp14b-202ENSMUST00000151622 3685 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd1P40201 Gm37536-201ENSMUST00000194710 2491 ntBASIC11.09□□□□□ -0.63
Chd1P40201 Rab7b-202ENSMUST00000064679 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd1P40201 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd1P40201 Gm13702-201ENSMUST00000118542 825 ntBASIC11.09□□□□□ -0.63
Chd1P40201 Gm25433-201ENSMUST00000158283 286 ntBASIC11.09□□□□□ -0.63
Chd1P40201 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC11.09□□□□□ -0.63
Chd1P40201 Ston1-207ENSMUST00000163588 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd1P40201 Gm20432-201ENSMUST00000173716 250 ntBASIC11.09□□□□□ -0.63
Chd1P40201 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd1P40201 Gm27295-201ENSMUST00000184264 153 ntBASIC11.09□□□□□ -0.63
Chd1P40201 Gm5260-201ENSMUST00000186157 949 ntBASIC11.09□□□□□ -0.63
Chd1P40201 Gm43382-201ENSMUST00000198954 838 ntBASIC11.09□□□□□ -0.63
Chd1P40201 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC11.09□□□□□ -0.63
Chd1P40201 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd1P40201 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd1P40201 Gm45718-201ENSMUST00000207577 3794 ntBASIC11.09□□□□□ -0.63
Chd1P40201 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Chd1P40201 Sh3bgrl2-201ENSMUST00000113215 4565 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd1P40201 5330417C22Rik-201ENSMUST00000048012 3321 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Chd1P40201 Dennd6a-204ENSMUST00000224248 2775 ntBASIC11.08□□□□□ -0.63
Chd1P40201 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC11.08□□□□□ -0.63
Chd1P40201 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd1P40201 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Chd1P40201 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.08□□□□□ -0.64
Chd1P40201 Gm42668-201ENSMUST00000200747 2487 ntBASIC11.08□□□□□ -0.64
Chd1P40201 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Chd1P40201 Zfp207-208ENSMUST00000188489 2898 ntAPPRIS ALT1 TSL 2 BASIC11.08□□□□□ -0.64
Chd1P40201 Gm43128-201ENSMUST00000202212 1621 ntBASIC11.08□□□□□ -0.64
Chd1P40201 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Chd1P40201 Tagap-201ENSMUST00000036370 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd1P40201 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd1P40201 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC11.08□□□□□ -0.64
Chd1P40201 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd1P40201 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd1P40201 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd1P40201 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Chd1P40201 Snord88a-201ENSMUST00000116723 90 ntBASIC11.08□□□□□ -0.64
Chd1P40201 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC11.08□□□□□ -0.64
Chd1P40201 Mup-ps16-201ENSMUST00000120085 596 ntBASIC11.08□□□□□ -0.64
Chd1P40201 Gm12438-201ENSMUST00000122034 336 ntBASIC11.08□□□□□ -0.64
Chd1P40201 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd1P40201 Gm37187-201ENSMUST00000193425 341 ntBASIC11.08□□□□□ -0.64
Chd1P40201 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC11.08□□□□□ -0.64
Chd1P40201 Gm7285-201ENSMUST00000198801 580 ntBASIC11.08□□□□□ -0.64
Chd1P40201 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC11.08□□□□□ -0.64
Chd1P40201 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC11.08□□□□□ -0.64
Chd1P40201 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Chd1P40201 Eya3-202ENSMUST00000079157 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd1P40201 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd1P40201 Ttc17-204ENSMUST00000111238 4590 ntTSL 5 BASIC11.08□□□□□ -0.64
Chd1P40201 Synj1-210ENSMUST00000170853 7012 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Chd1P40201 Phactr1-205ENSMUST00000128646 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd1P40201 Zfp607a-201ENSMUST00000053722 2061 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Chd1P40201 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd1P40201 Birc5-202ENSMUST00000093906 3334 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd1P40201 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd1P40201 Gm9030-201ENSMUST00000218405 2410 ntBASIC11.08□□□□□ -0.64
Chd1P40201 Gm9029-201ENSMUST00000219232 2410 ntBASIC11.08□□□□□ -0.64
Chd1P40201 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Chd1P40201 Ccr6-201ENSMUST00000097418 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd1P40201 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd1P40201 Uba1-202ENSMUST00000089217 4044 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd1P40201 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Chd1P40201 AC158779.1-201ENSMUST00000228912 3861 ntBASIC11.07□□□□□ -0.64
Chd1P40201 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Chd1P40201 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Chd1P40201 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd1P40201 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd1P40201 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Chd1P40201 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Chd1P40201 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Chd1P40201 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chd1P40201 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC11.07□□□□□ -0.64
Chd1P40201 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Chd1P40201 Gm38022-201ENSMUST00000191762 403 ntBASIC11.07□□□□□ -0.64
Chd1P40201 Gm38226-201ENSMUST00000192207 521 ntBASIC11.07□□□□□ -0.64
Chd1P40201 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC11.07□□□□□ -0.64
Chd1P40201 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Chd1P40201 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chd1P40201 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC11.07□□□□□ -0.64
Chd1P40201 AC122309.1-201ENSMUST00000226945 421 ntBASIC11.07□□□□□ -0.64
Chd1P40201 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd1P40201 Ogdhl-201ENSMUST00000022480 3449 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Chd1P40201 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd1P40201 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd1P40201 Gm18716-201ENSMUST00000204507 1603 ntBASIC11.07□□□□□ -0.64
Chd1P40201 Ncam1-202ENSMUST00000166811 3088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd1P40201 Elmo1-201ENSMUST00000072519 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd1P40201 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd1P40201 Synj2-209ENSMUST00000115790 4808 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Chd1P40201 Rpgr-203ENSMUST00000073392 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd1P40201 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd1P40201 Gm29154-211ENSMUST00000213655 1499 ntTSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms