Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm42723-201ENSMUST00000199966 1044 ntBASIC9.81□□□□□ -0.84
Col18a1P39061 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC9.81□□□□□ -0.84
Col18a1P39061 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC9.81□□□□□ -0.84
Col18a1P39061 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col18a1P39061 Mir425-201ENSMUST00000083645 85 ntBASIC9.81□□□□□ -0.84
Col18a1P39061 Gm43123-201ENSMUST00000201893 3471 ntBASIC9.81□□□□□ -0.84
Col18a1P39061 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col18a1P39061 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col18a1P39061 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col18a1P39061 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col18a1P39061 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col18a1P39061 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col18a1P39061 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col18a1P39061 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Col18a1P39061 Kcnj5-202ENSMUST00000214223 3101 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Col18a1P39061 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col18a1P39061 Zfp207-208ENSMUST00000188489 2898 ntAPPRIS ALT1 TSL 2 BASIC9.81□□□□□ -0.84
Col18a1P39061 Gm45532-201ENSMUST00000210342 3620 ntBASIC9.81□□□□□ -0.84
Col18a1P39061 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Col18a1P39061 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col18a1P39061 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col18a1P39061 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col18a1P39061 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col18a1P39061 Gm43915-201ENSMUST00000203013 5037 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col18a1P39061 Gm15128-201ENSMUST00000112814 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col18a1P39061 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC9.8□□□□□ -0.84
Col18a1P39061 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC9.8□□□□□ -0.84
Col18a1P39061 Snord88a-201ENSMUST00000116723 90 ntBASIC9.8□□□□□ -0.84
Col18a1P39061 Gm14018-201ENSMUST00000119042 455 ntBASIC9.8□□□□□ -0.84
Col18a1P39061 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC9.8□□□□□ -0.84
Col18a1P39061 Gm13754-201ENSMUST00000120486 998 ntBASIC9.8□□□□□ -0.84
Col18a1P39061 Gm15242-201ENSMUST00000122459 283 ntBASIC9.8□□□□□ -0.84
Col18a1P39061 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Col18a1P39061 Gm5694-201ENSMUST00000195648 641 ntBASIC9.8□□□□□ -0.84
Col18a1P39061 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC9.8□□□□□ -0.84
Col18a1P39061 Gm7441-201ENSMUST00000220697 1074 ntBASIC9.8□□□□□ -0.84
Col18a1P39061 AC126685.1-201ENSMUST00000221001 121 ntBASIC9.8□□□□□ -0.84
Col18a1P39061 AC137871.3-201ENSMUST00000226628 225 ntBASIC9.8□□□□□ -0.84
Col18a1P39061 Gm10221-201ENSMUST00000088299 309 ntBASIC9.8□□□□□ -0.84
Col18a1P39061 Mfn2-201ENSMUST00000030884 4341 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Col18a1P39061 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC9.8□□□□□ -0.84
Col18a1P39061 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Col18a1P39061 CT025642.3-201ENSMUST00000225503 4086 ntBASIC9.8□□□□□ -0.84
Col18a1P39061 Stk36-202ENSMUST00000087186 4065 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Col18a1P39061 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Col18a1P39061 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Col18a1P39061 Gm37048-201ENSMUST00000194827 5578 ntBASIC9.8□□□□□ -0.84
Col18a1P39061 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Col18a1P39061 Mlip-210ENSMUST00000184322 2668 ntTSL 5 BASIC9.8□□□□□ -0.84
Col18a1P39061 Abcc8-201ENSMUST00000033123 4877 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Col18a1P39061 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Col18a1P39061 Gpatch2-208ENSMUST00000160570 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Col18a1P39061 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Col18a1P39061 Ncam1-202ENSMUST00000166811 3088 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Col18a1P39061 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Col18a1P39061 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Col18a1P39061 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Col18a1P39061 Gm3076-201ENSMUST00000161613 451 ntBASIC9.8□□□□□ -0.84
Col18a1P39061 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Col18a1P39061 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Col18a1P39061 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC9.8□□□□□ -0.84
Col18a1P39061 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC9.8□□□□□ -0.84
Col18a1P39061 Gm43037-201ENSMUST00000196808 250 ntBASIC9.8□□□□□ -0.84
Col18a1P39061 Gm8190-201ENSMUST00000199603 586 ntBASIC9.8□□□□□ -0.84
Col18a1P39061 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC9.8□□□□□ -0.84
Col18a1P39061 AC107663.1-201ENSMUST00000224257 468 ntBASIC9.8□□□□□ -0.84
Col18a1P39061 AC132881.2-201ENSMUST00000225474 709 ntBASIC9.8□□□□□ -0.84
Col18a1P39061 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC9.8□□□□□ -0.84
Col18a1P39061 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Col18a1P39061 Mtmr4-202ENSMUST00000103179 5753 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Col18a1P39061 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Col18a1P39061 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Col18a1P39061 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Col18a1P39061 Smoc1-202ENSMUST00000110347 3496 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Col18a1P39061 Zfp563-201ENSMUST00000131722 1938 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Col18a1P39061 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Col18a1P39061 Ogdhl-201ENSMUST00000022480 3449 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Col18a1P39061 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col18a1P39061 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC9.79□□□□□ -0.84
Col18a1P39061 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col18a1P39061 Ambn-201ENSMUST00000031226 1854 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col18a1P39061 Lpin1-202ENSMUST00000111067 5433 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col18a1P39061 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Col18a1P39061 Ank3-237ENSMUST00000183074 4948 ntTSL 5 BASIC9.79□□□□□ -0.84
Col18a1P39061 Shc4-201ENSMUST00000042246 4059 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col18a1P39061 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Col18a1P39061 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Col18a1P39061 Ovol1-201ENSMUST00000025861 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col18a1P39061 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Col18a1P39061 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Col18a1P39061 Gm25724-201ENSMUST00000104531 117 ntBASIC9.79□□□□□ -0.84
Col18a1P39061 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col18a1P39061 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Col18a1P39061 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col18a1P39061 Gm13772-201ENSMUST00000118431 317 ntBASIC9.79□□□□□ -0.84
Col18a1P39061 Gm5319-201ENSMUST00000118965 873 ntBASIC9.79□□□□□ -0.84
Col18a1P39061 Gm23896-201ENSMUST00000158109 130 ntBASIC9.79□□□□□ -0.84
Col18a1P39061 Gm27854-201ENSMUST00000175578 244 ntBASIC9.79□□□□□ -0.84
Col18a1P39061 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC9.79□□□□□ -0.84
Col18a1P39061 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 105.4 ms