Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
Usp4P35123 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Usp4P35123 Enpp4-202ENSMUST00000143137 4445 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
Usp4P35123 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Usp4P35123 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Usp4P35123 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC8.06□□□□□ -1.12
Usp4P35123 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Usp4P35123 Gm25509-201ENSMUST00000116985 106 ntBASIC8.06□□□□□ -1.12
Usp4P35123 Gm14301-201ENSMUST00000120181 324 ntBASIC8.06□□□□□ -1.12
Usp4P35123 Gm12123-201ENSMUST00000120348 472 ntBASIC8.06□□□□□ -1.12
Usp4P35123 Gm11954-201ENSMUST00000121403 349 ntBASIC8.06□□□□□ -1.12
Usp4P35123 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC8.06□□□□□ -1.12
Usp4P35123 Gm13012-202ENSMUST00000155349 849 ntTSL 2 BASIC8.06□□□□□ -1.12
Usp4P35123 Gm23222-201ENSMUST00000158117 76 ntBASIC8.06□□□□□ -1.12
Usp4P35123 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC8.06□□□□□ -1.12
Usp4P35123 Gm20638-201ENSMUST00000175796 550 ntTSL 5 BASIC8.06□□□□□ -1.12
Usp4P35123 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC8.06□□□□□ -1.12
Usp4P35123 Gm27288-201ENSMUST00000184215 80 ntBASIC8.06□□□□□ -1.12
Usp4P35123 Gm27597-201ENSMUST00000184365 80 ntBASIC8.06□□□□□ -1.12
Usp4P35123 4930535O05Rik-201ENSMUST00000184406 419 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Gm27506-201ENSMUST00000184558 80 ntBASIC8.06□□□□□ -1.12
Usp4P35123 Gm27529-201ENSMUST00000184975 80 ntBASIC8.06□□□□□ -1.12
Usp4P35123 Gm27907-201ENSMUST00000185101 80 ntBASIC8.06□□□□□ -1.12
Usp4P35123 Gm28530-201ENSMUST00000190473 577 ntBASIC8.06□□□□□ -1.12
Usp4P35123 Gm36961-201ENSMUST00000191980 132 ntBASIC8.06□□□□□ -1.12
Usp4P35123 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC8.06□□□□□ -1.12
Usp4P35123 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC8.06□□□□□ -1.12
Usp4P35123 Gm37517-201ENSMUST00000194004 1289 ntBASIC8.06□□□□□ -1.12
Usp4P35123 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC8.06□□□□□ -1.12
Usp4P35123 Gm7478-201ENSMUST00000201054 581 ntBASIC8.06□□□□□ -1.12
Usp4P35123 2510016D11Rik-201ENSMUST00000201971 985 ntBASIC8.06□□□□□ -1.12
Usp4P35123 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC8.06□□□□□ -1.12
Usp4P35123 Gm8489-201ENSMUST00000209876 1152 ntBASIC8.06□□□□□ -1.12
Usp4P35123 Gm45255-201ENSMUST00000209943 811 ntBASIC8.06□□□□□ -1.12
Usp4P35123 AC132104.1-201ENSMUST00000213615 260 ntBASIC8.06□□□□□ -1.12
Usp4P35123 AC155644.1-201ENSMUST00000218527 890 ntTSL 5 BASIC8.06□□□□□ -1.12
Usp4P35123 Gm5948-201ENSMUST00000219627 839 ntBASIC8.06□□□□□ -1.12
Usp4P35123 Gsta2-201ENSMUST00000034902 870 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Usp4P35123 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Usp4P35123 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
Usp4P35123 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Usp4P35123 Gm26629-201ENSMUST00000180848 2276 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Usp4P35123 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
Usp4P35123 Gm20539-201ENSMUST00000174811 1384 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Zranb1-201ENSMUST00000033265 2210 ntAPPRIS P2 TSL 2 BASIC8.06□□□□□ -1.12
Usp4P35123 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Parp11-203ENSMUST00000112193 1725 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 D3Ertd751e-208ENSMUST00000192193 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Usp4P35123 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp4P35123 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Usp4P35123 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp4P35123 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp4P35123 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp4P35123 Gm42648-201ENSMUST00000200774 2505 ntBASIC8.05□□□□□ -1.12
Usp4P35123 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC8.05□□□□□ -1.12
Usp4P35123 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Usp4P35123 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp4P35123 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp4P35123 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp4P35123 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp4P35123 Tex52-202ENSMUST00000130785 1424 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Usp4P35123 Cd247-208ENSMUST00000178336 2807 ntTSL 5 BASIC8.05□□□□□ -1.12
Usp4P35123 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp4P35123 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp4P35123 Rgs8-204ENSMUST00000111814 678 ntTSL 3 BASIC8.05□□□□□ -1.12
Usp4P35123 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC8.05□□□□□ -1.12
Usp4P35123 Gm15028-201ENSMUST00000120295 370 ntBASIC8.05□□□□□ -1.12
Usp4P35123 Gm12105-201ENSMUST00000120846 779 ntBASIC8.05□□□□□ -1.12
Usp4P35123 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC8.05□□□□□ -1.12
Usp4P35123 Gm14642-201ENSMUST00000147357 470 ntTSL 3 BASIC8.05□□□□□ -1.12
Usp4P35123 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC8.05□□□□□ -1.12
Usp4P35123 Gm25721-201ENSMUST00000157496 171 ntBASIC8.05□□□□□ -1.12
Usp4P35123 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC8.05□□□□□ -1.12
Usp4P35123 Gm20627-202ENSMUST00000176275 564 ntTSL 5 BASIC8.05□□□□□ -1.12
Usp4P35123 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms