Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Cdx1P18111 Dctn5-201ENSMUST00000033156 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Cdx1P18111 Gm43413-201ENSMUST00000200411 1566 ntBASIC6.14□□□□□ -1.43
Cdx1P18111 Slc31a1-201ENSMUST00000084526 3718 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cdx1P18111 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cdx1P18111 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cdx1P18111 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cdx1P18111 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cdx1P18111 Gm9903-201ENSMUST00000181102 1747 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cdx1P18111 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.14□□□□□ -1.43
Cdx1P18111 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC6.14□□□□□ -1.43
Cdx1P18111 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Cdx1P18111 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cdx1P18111 Gm15154-201ENSMUST00000117590 366 ntBASIC6.14□□□□□ -1.43
Cdx1P18111 Gm12792-201ENSMUST00000117669 1019 ntBASIC6.14□□□□□ -1.43
Cdx1P18111 Ccdc50-ps-201ENSMUST00000118044 941 ntBASIC6.14□□□□□ -1.43
Cdx1P18111 Gm11987-201ENSMUST00000118524 381 ntBASIC6.14□□□□□ -1.43
Cdx1P18111 Gm11245-201ENSMUST00000119419 1037 ntBASIC6.14□□□□□ -1.43
Cdx1P18111 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC6.14□□□□□ -1.43
Cdx1P18111 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC6.14□□□□□ -1.43
Cdx1P18111 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC6.14□□□□□ -1.43
Cdx1P18111 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cdx1P18111 Gm17051-201ENSMUST00000170787 487 ntBASIC6.14□□□□□ -1.43
Cdx1P18111 Apol11a-201ENSMUST00000172191 1132 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Cdx1P18111 Gm17157-201ENSMUST00000172397 348 ntBASIC6.14□□□□□ -1.43
Cdx1P18111 Gm20918-201ENSMUST00000179629 684 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Cdx1P18111 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cdx1P18111 Gm29142-201ENSMUST00000188009 696 ntBASIC6.14□□□□□ -1.43
Cdx1P18111 Gm28508-201ENSMUST00000188016 696 ntBASIC6.14□□□□□ -1.43
Cdx1P18111 Gm29041-201ENSMUST00000189199 380 ntBASIC6.14□□□□□ -1.43
Cdx1P18111 Gm29439-201ENSMUST00000189996 509 ntTSL 3 BASIC6.14□□□□□ -1.43
Cdx1P18111 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Cdx1P18111 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC6.14□□□□□ -1.43
Cdx1P18111 Scp2-ps1-201ENSMUST00000193152 499 ntBASIC6.14□□□□□ -1.43
Cdx1P18111 Gm6522-201ENSMUST00000197160 1203 ntBASIC6.14□□□□□ -1.43
Cdx1P18111 Plut-203ENSMUST00000201192 569 ntTSL 3 BASIC6.14□□□□□ -1.43
Cdx1P18111 Klk1b14-ps-201ENSMUST00000206059 777 ntBASIC6.14□□□□□ -1.43
Cdx1P18111 AC118750.1-201ENSMUST00000214163 675 ntTSL 3 BASIC6.14□□□□□ -1.43
Cdx1P18111 AC158799.1-201ENSMUST00000214686 617 ntTSL 5 BASIC6.14□□□□□ -1.43
Cdx1P18111 D330037F02Rik-202ENSMUST00000217400 1247 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cdx1P18111 AC159649.1-201ENSMUST00000220851 977 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cdx1P18111 AC154603.2-201ENSMUST00000223896 577 ntBASIC6.14□□□□□ -1.43
Cdx1P18111 AC158531.2-201ENSMUST00000224264 473 ntBASIC6.14□□□□□ -1.43
Cdx1P18111 AC126691.2-201ENSMUST00000226185 249 ntBASIC6.14□□□□□ -1.43
Cdx1P18111 Mir486-201ENSMUST00000093576 128 ntBASIC6.14□□□□□ -1.43
Cdx1P18111 Mrgprb4-201ENSMUST00000094388 1219 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Cdx1P18111 Gpr1-201ENSMUST00000050536 1940 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cdx1P18111 Gm43430-201ENSMUST00000196513 3897 ntBASIC6.14□□□□□ -1.43
Cdx1P18111 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Cdx1P18111 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC6.14□□□□□ -1.43
Cdx1P18111 Gm5605-201ENSMUST00000208940 1305 ntBASIC6.14□□□□□ -1.43
Cdx1P18111 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cdx1P18111 Gm44834-201ENSMUST00000206671 1396 ntBASIC6.14□□□□□ -1.43
Cdx1P18111 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cdx1P18111 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Cdx1P18111 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cdx1P18111 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cdx1P18111 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx1P18111 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx1P18111 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx1P18111 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx1P18111 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx1P18111 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx1P18111 Mbnl2-203ENSMUST00000226800 3328 ntBASIC6.13□□□□□ -1.43
Cdx1P18111 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx1P18111 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx1P18111 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC6.13□□□□□ -1.43
Cdx1P18111 Gm7831-201ENSMUST00000117990 552 ntBASIC6.13□□□□□ -1.43
Cdx1P18111 Gm15062-201ENSMUST00000120567 367 ntBASIC6.13□□□□□ -1.43
Cdx1P18111 Gm12120-201ENSMUST00000125068 592 ntTSL 3 BASIC6.13□□□□□ -1.43
Cdx1P18111 Gm13218-201ENSMUST00000128180 265 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx1P18111 Gm15343-201ENSMUST00000136382 640 ntTSL 3 BASIC6.13□□□□□ -1.43
Cdx1P18111 Gm12861-201ENSMUST00000145395 681 ntTSL 3 BASIC6.13□□□□□ -1.43
Cdx1P18111 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC6.13□□□□□ -1.43
Cdx1P18111 Tle6-213ENSMUST00000151858 627 ntTSL 3 BASIC6.13□□□□□ -1.43
Cdx1P18111 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.13□□□□□ -1.43
Cdx1P18111 Milr1-208ENSMUST00000183111 982 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx1P18111 Mir6972-201ENSMUST00000184774 64 ntBASIC6.13□□□□□ -1.43
Cdx1P18111 2310005E17Rik-201ENSMUST00000186644 1187 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx1P18111 Gm29491-201ENSMUST00000189481 506 ntTSL 5 BASIC6.13□□□□□ -1.43
Cdx1P18111 4930474B08Rik-201ENSMUST00000194161 837 ntBASIC6.13□□□□□ -1.43
Cdx1P18111 Gm38328-201ENSMUST00000195582 317 ntBASIC6.13□□□□□ -1.43
Cdx1P18111 4833412C05Rik-202ENSMUST00000208257 850 ntTSL 3 BASIC6.13□□□□□ -1.43
Cdx1P18111 Gm30196-201ENSMUST00000208957 160 ntBASIC6.13□□□□□ -1.43
Cdx1P18111 Gm45712-201ENSMUST00000212417 335 ntBASIC6.13□□□□□ -1.43
Cdx1P18111 AV026068-218ENSMUST00000223980 575 ntBASIC6.13□□□□□ -1.43
Cdx1P18111 AC121542.2-201ENSMUST00000227529 400 ntBASIC6.13□□□□□ -1.43
Cdx1P18111 Tmem216-201ENSMUST00000025569 1101 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx1P18111 Gm5564-201ENSMUST00000034916 967 ntBASIC6.13□□□□□ -1.43
Cdx1P18111 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Cdx1P18111 Lyrm2-201ENSMUST00000062802 465 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx1P18111 Ocm-202ENSMUST00000085704 330 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Cdx1P18111 Tac1-201ENSMUST00000090679 980 ntTSL 5 BASIC6.13□□□□□ -1.43
Cdx1P18111 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx1P18111 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC6.13□□□□□ -1.43
Cdx1P18111 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx1P18111 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx1P18111 Serpina1a-202ENSMUST00000085056 1360 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx1P18111 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Cdx1P18111 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms