Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Fam217a-201ENSMUST00000021851 2402 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 C79130-201ENSMUST00000199610 4296 ntBASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Gm45887-201ENSMUST00000212672 2998 ntBASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Ranbp9-208ENSMUST00000222651 1951 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 AC158605.4-201ENSMUST00000219013 3361 ntBASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 BC064078-201ENSMUST00000122939 570 ntBASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 AC151971.3-201ENSMUST00000214694 404 ntBASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 AC167013.3-201ENSMUST00000228110 989 ntBASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Gm44763-201ENSMUST00000208287 2019 ntBASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Ank3-219ENSMUST00000182437 3113 ntTSL 5 BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Olfr282-204ENSMUST00000215320 1573 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Net1-202ENSMUST00000099946 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Gm23440-201ENSMUST00000104299 130 ntBASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Gm11481-201ENSMUST00000120069 255 ntBASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Gm23546-201ENSMUST00000158211 137 ntBASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Gm42663-201ENSMUST00000199883 351 ntBASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Gm7554-201ENSMUST00000202282 574 ntBASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Gm18592-201ENSMUST00000221529 276 ntBASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Gm6049-201ENSMUST00000222369 458 ntBASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Gm43533-201ENSMUST00000202933 2936 ntBASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Gm37735-201ENSMUST00000193995 1406 ntBASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 D630033O11Rik-205ENSMUST00000210802 2761 ntTSL 5 BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Gm23948-201ENSMUST00000104030 132 ntBASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Gm22882-201ENSMUST00000157749 124 ntBASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Olfr523-203ENSMUST00000213953 3445 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Adgrd1-203ENSMUST00000156437 4141 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col6a3E9PWQ3 Ifit1-201ENSMUST00000102824 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Sfmbt1-204ENSMUST00000227303 2960 ntBASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Gm12970-201ENSMUST00000134911 581 ntTSL 3 BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Gm9529-201ENSMUST00000177598 579 ntBASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Gm22420-201ENSMUST00000178795 126 ntBASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Gm28017-201ENSMUST00000183434 126 ntBASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Gm18600-201ENSMUST00000207205 505 ntBASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 AC156574.1-201ENSMUST00000227084 452 ntBASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Paqr7-202ENSMUST00000095074 3550 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Tec-203ENSMUST00000113594 2580 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Gm43800-201ENSMUST00000201868 2731 ntBASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Crtam-201ENSMUST00000034519 1876 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Runx1t1-203ENSMUST00000098257 2332 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Wwtr1-202ENSMUST00000120977 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Gm37647-201ENSMUST00000194556 3143 ntBASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Ndrg3-203ENSMUST00000109558 4023 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Tgfb1i1-204ENSMUST00000164710 3788 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Gm7882-201ENSMUST00000177915 1762 ntBASIC7.18□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms