Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
Col4a6B1AVK5 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
Col4a6B1AVK5 Rreb1-203ENSMUST00000110238 7437 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Col4a6B1AVK5 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Col4a6B1AVK5 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC7.65□□□□□ -1.19
Col4a6B1AVK5 Mycbpap-202ENSMUST00000093945 3168 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Mcf2-202ENSMUST00000063507 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Gm37080-201ENSMUST00000194804 2404 ntBASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Gm22374-201ENSMUST00000104583 132 ntBASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Gm5843-201ENSMUST00000121631 476 ntBASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Gm2709-201ENSMUST00000142979 350 ntBASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Gm26169-201ENSMUST00000158420 135 ntBASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Gm21877-201ENSMUST00000185640 694 ntBASIC7.64□□□□□ -1.19
Col4a6B1AVK5 AC117240.1-201ENSMUST00000199436 61 ntBASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 AC127242.3-201ENSMUST00000222009 580 ntBASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Gm36758-201ENSMUST00000222594 310 ntBASIC7.64□□□□□ -1.19
Col4a6B1AVK5 AC165157.1-201ENSMUST00000222981 580 ntBASIC7.64□□□□□ -1.19
Col4a6B1AVK5 AC121542.2-201ENSMUST00000227529 400 ntBASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Grik2-201ENSMUST00000079751 2610 ntTSL 2 BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Dido1-206ENSMUST00000103057 4906 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 AC132465.1-201ENSMUST00000219938 1307 ntBASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Gm43168-201ENSMUST00000201039 1612 ntBASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Zfp68-202ENSMUST00000085852 3318 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Ano7-202ENSMUST00000186641 3984 ntAPPRIS P3 TSL 5 BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Gys2-201ENSMUST00000032371 2657 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Rnf19a-203ENSMUST00000228358 3452 ntBASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a6B1AVK5 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Apc-ps1-201ENSMUST00000119356 470 ntBASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Gm12244-201ENSMUST00000119500 291 ntBASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Gm9005-201ENSMUST00000119908 607 ntBASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Mir7020-201ENSMUST00000183787 70 ntBASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Gm43048-201ENSMUST00000196101 388 ntBASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Gm8728-201ENSMUST00000207367 2178 ntBASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Gm8486-201ENSMUST00000207508 2171 ntBASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Gm8685-201ENSMUST00000207567 2183 ntBASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Gm16443-201ENSMUST00000207909 2184 ntBASIC7.63□□□□□ -1.19
Col4a6B1AVK5 AC124184.1-201ENSMUST00000218167 283 ntBASIC7.63□□□□□ -1.19
Col4a6B1AVK5 AC174082.2-201ENSMUST00000222094 543 ntBASIC7.63□□□□□ -1.19
Col4a6B1AVK5 AC187103.4-201ENSMUST00000225399 300 ntBASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Unc13d-202ENSMUST00000106450 4046 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Gm37373-201ENSMUST00000194005 2812 ntBASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Trub1-202ENSMUST00000026073 3795 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Ceacam20-201ENSMUST00000094753 2888 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Katnal1-201ENSMUST00000047257 6157 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Olfr6-202ENSMUST00000213552 4349 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Rin3-204ENSMUST00000133820 3755 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Cacna1c-204ENSMUST00000112793 6669 ntAPPRIS P4 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Cacna1c-208ENSMUST00000187317 6663 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Gm43430-201ENSMUST00000196513 3897 ntBASIC7.63□□□□□ -1.19
Col4a6B1AVK5 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Adgrl2-217ENSMUST00000200154 5412 ntTSL 5 BASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Gabrq-202ENSMUST00000114553 4943 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Slco6b1-202ENSMUST00000178359 1778 ntBASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Ppfia1-202ENSMUST00000182226 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC7.63□□□□□ -1.19
Col4a6B1AVK5 Gm25498-201ENSMUST00000104424 129 ntBASIC7.63□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms