Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm12464-201ENSMUST00000121385 1016 ntBASIC7.08□□□□□ -1.28
Use1Q9CQ56 Gm25320-201ENSMUST00000122551 324 ntBASIC7.08□□□□□ -1.28
Use1Q9CQ56 Gm8865-201ENSMUST00000125697 430 ntBASIC7.08□□□□□ -1.28
Use1Q9CQ56 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC7.08□□□□□ -1.28
Use1Q9CQ56 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC7.08□□□□□ -1.28
Use1Q9CQ56 Defa-ps3-201ENSMUST00000142705 282 ntBASIC7.08□□□□□ -1.28
Use1Q9CQ56 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Use1Q9CQ56 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Use1Q9CQ56 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Use1Q9CQ56 Gm22811-201ENSMUST00000157468 154 ntBASIC7.08□□□□□ -1.28
Use1Q9CQ56 Gm17051-201ENSMUST00000170787 487 ntBASIC7.08□□□□□ -1.28
Use1Q9CQ56 Gm22132-201ENSMUST00000175316 100 ntBASIC7.08□□□□□ -1.28
Use1Q9CQ56 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC7.08□□□□□ -1.28
Use1Q9CQ56 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC7.08□□□□□ -1.28
Use1Q9CQ56 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Use1Q9CQ56 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Use1Q9CQ56 Gm8004-201ENSMUST00000187782 617 ntBASIC7.08□□□□□ -1.28
Use1Q9CQ56 Gm5851-201ENSMUST00000194132 1204 ntBASIC7.08□□□□□ -1.28
Use1Q9CQ56 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC7.08□□□□□ -1.28
Use1Q9CQ56 Fxyd4-208ENSMUST00000204950 586 ntTSL 3 BASIC7.08□□□□□ -1.28
Use1Q9CQ56 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC7.08□□□□□ -1.28
Use1Q9CQ56 Gm9689-201ENSMUST00000210009 428 ntBASIC7.08□□□□□ -1.28
Use1Q9CQ56 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC7.08□□□□□ -1.28
Use1Q9CQ56 AC122539.2-201ENSMUST00000220207 404 ntBASIC7.08□□□□□ -1.28
Use1Q9CQ56 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Use1Q9CQ56 Gm10283-201ENSMUST00000093494 354 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Use1Q9CQ56 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC7.08□□□□□ -1.28
Use1Q9CQ56 AC124414.1-201ENSMUST00000218033 2946 ntBASIC7.08□□□□□ -1.28
Use1Q9CQ56 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Use1Q9CQ56 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Use1Q9CQ56 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Use1Q9CQ56 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Use1Q9CQ56 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC7.08□□□□□ -1.28
Use1Q9CQ56 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Use1Q9CQ56 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC7.08□□□□□ -1.28
Use1Q9CQ56 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Use1Q9CQ56 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Use1Q9CQ56 AC159264.1-201ENSMUST00000224844 4257 ntBASIC7.07□□□□□ -1.28
Use1Q9CQ56 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Use1Q9CQ56 AC154270.2-201ENSMUST00000226755 2306 ntBASIC7.07□□□□□ -1.28
Use1Q9CQ56 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC7.07□□□□□ -1.28
Use1Q9CQ56 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Gm43581-201ENSMUST00000196766 2864 ntBASIC7.07□□□□□ -1.28
Use1Q9CQ56 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Use1Q9CQ56 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Use1Q9CQ56 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Gm24334-201ENSMUST00000104210 128 ntBASIC7.07□□□□□ -1.28
Use1Q9CQ56 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Gm13323-201ENSMUST00000120245 1151 ntBASIC7.07□□□□□ -1.28
Use1Q9CQ56 Gm11895-201ENSMUST00000122165 467 ntBASIC7.07□□□□□ -1.28
Use1Q9CQ56 Gm13828-201ENSMUST00000122278 363 ntBASIC7.07□□□□□ -1.28
Use1Q9CQ56 Lypd8-201ENSMUST00000013787 1093 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Gm23094-201ENSMUST00000157551 322 ntBASIC7.07□□□□□ -1.28
Use1Q9CQ56 Traj54-201ENSMUST00000165071 54 ntBASIC7.07□□□□□ -1.28
Use1Q9CQ56 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Milr1-208ENSMUST00000183111 982 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Gm14214-201ENSMUST00000184654 678 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC7.07□□□□□ -1.28
Use1Q9CQ56 1700096J18Rik-201ENSMUST00000190043 482 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Gm45283-201ENSMUST00000210593 628 ntBASIC7.07□□□□□ -1.28
Use1Q9CQ56 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC7.07□□□□□ -1.28
Use1Q9CQ56 AC163296.1-202ENSMUST00000218395 661 ntBASIC7.07□□□□□ -1.28
Use1Q9CQ56 AC163296.1-201ENSMUST00000220004 1266 ntBASIC7.07□□□□□ -1.28
Use1Q9CQ56 CT030170.6-202ENSMUST00000223186 544 ntBASIC7.07□□□□□ -1.28
Use1Q9CQ56 Olfr641-201ENSMUST00000098183 939 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Gm43279-201ENSMUST00000202376 2512 ntBASIC7.07□□□□□ -1.28
Use1Q9CQ56 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC7.07□□□□□ -1.28
Use1Q9CQ56 AC166341.5-201ENSMUST00000222206 1400 ntBASIC7.07□□□□□ -1.28
Use1Q9CQ56 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Use1Q9CQ56 Gm43533-201ENSMUST00000202933 2936 ntBASIC7.07□□□□□ -1.28
Use1Q9CQ56 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Use1Q9CQ56 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Use1Q9CQ56 AC164437.5-201ENSMUST00000227235 4414 ntBASIC7.07□□□□□ -1.28
Use1Q9CQ56 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Ssr3-201ENSMUST00000029414 2957 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms