Protein–RNA interactions for Protein: Q99MV7

Rnf17, RING finger protein 17, mousemouse

Predictions only

Length 1,640 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf17Q99MV7 Slc26a1-204ENSMUST00000163328 3015 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf17Q99MV7 Ehmt1-204ENSMUST00000114418 4902 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Rnf17Q99MV7 Epas1-201ENSMUST00000024954 5309 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf17Q99MV7 Cbr4-201ENSMUST00000034058 4309 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf17Q99MV7 Gm26340-201ENSMUST00000102365 99 ntBASIC10.96□□□□□ -0.65
Rnf17Q99MV7 Gm25785-201ENSMUST00000104129 125 ntBASIC10.96□□□□□ -0.65
Rnf17Q99MV7 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Rnf17Q99MV7 Gm14891-201ENSMUST00000117378 596 ntBASIC10.96□□□□□ -0.65
Rnf17Q99MV7 Gm15209-201ENSMUST00000117703 400 ntBASIC10.96□□□□□ -0.65
Rnf17Q99MV7 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf17Q99MV7 Gm44422-201ENSMUST00000204142 1025 ntBASIC10.96□□□□□ -0.65
Rnf17Q99MV7 Gm44861-201ENSMUST00000208325 1220 ntBASIC10.96□□□□□ -0.65
Rnf17Q99MV7 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf17Q99MV7 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Rnf17Q99MV7 AC166574.7-201ENSMUST00000228502 704 ntBASIC10.96□□□□□ -0.65
Rnf17Q99MV7 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Rnf17Q99MV7 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf17Q99MV7 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Rnf17Q99MV7 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf17Q99MV7 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf17Q99MV7 AU020206-202ENSMUST00000206358 3009 ntBASIC10.96□□□□□ -0.65
Rnf17Q99MV7 Sptan1-208ENSMUST00000129241 7585 ntTSL 5 BASIC10.96□□□□□ -0.66
Rnf17Q99MV7 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf17Q99MV7 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf17Q99MV7 D130040H23Rik-204ENSMUST00000212549 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf17Q99MV7 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC10.96□□□□□ -0.66
Rnf17Q99MV7 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf17Q99MV7 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Rnf17Q99MV7 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf17Q99MV7 Cfap65-201ENSMUST00000094844 5727 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf17Q99MV7 Arhgef7-202ENSMUST00000074856 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf17Q99MV7 Pex5l-210ENSMUST00000193681 3620 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf17Q99MV7 Slc24a1-201ENSMUST00000037798 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf17Q99MV7 CT010577.1-202ENSMUST00000226187 1903 ntBASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 CT010505.3-201ENSMUST00000227835 1651 ntBASIC10.95□□□□□ -0.66
Rnf17Q99MV7 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Gm22774-201ENSMUST00000102084 109 ntBASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Gm24687-201ENSMUST00000157758 241 ntBASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Gm18006-201ENSMUST00000177411 662 ntBASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 AC127242.3-201ENSMUST00000222009 580 ntBASIC10.95□□□□□ -0.66
Rnf17Q99MV7 AC165157.1-201ENSMUST00000222981 580 ntBASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Gm42444-201ENSMUST00000199366 4558 ntBASIC10.95□□□□□ -0.66
Rnf17Q99MV7 AC101875.1-201ENSMUST00000222666 2223 ntBASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Zfp541-201ENSMUST00000108509 4561 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Phc1-201ENSMUST00000079560 3839 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 6820431F20Rik-202ENSMUST00000153748 4659 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Serpinc1-201ENSMUST00000064725 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Gm7435-202ENSMUST00000216003 2424 ntBASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Gm38339-201ENSMUST00000195479 1829 ntBASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Hmgxb4-201ENSMUST00000041759 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Gm25498-201ENSMUST00000104424 129 ntBASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Gm11902-201ENSMUST00000118849 270 ntBASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Gm15712-201ENSMUST00000120369 1156 ntBASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Gm16557-201ENSMUST00000159182 191 ntBASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Gm7867-201ENSMUST00000189856 546 ntBASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Gm2860-201ENSMUST00000199226 707 ntBASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Myo1f-201ENSMUST00000087605 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf17Q99MV7 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf17Q99MV7 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Rnf17Q99MV7 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC10.94□□□□□ -0.66
Rnf17Q99MV7 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf17Q99MV7 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Rnf17Q99MV7 Acly-207ENSMUST00000165111 4162 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf17Q99MV7 Ccdc71-202ENSMUST00000193170 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf17Q99MV7 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf17Q99MV7 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf17Q99MV7 Gm37080-201ENSMUST00000194804 2404 ntBASIC10.94□□□□□ -0.66
Rnf17Q99MV7 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC10.94□□□□□ -0.66
Rnf17Q99MV7 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC10.94□□□□□ -0.66
Rnf17Q99MV7 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf17Q99MV7 Rimklb-206ENSMUST00000204731 3039 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf17Q99MV7 Sh3bgrl2-201ENSMUST00000113215 4565 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf17Q99MV7 Fam107a-201ENSMUST00000036070 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf17Q99MV7 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms