Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm6878-201ENSMUST00000100448 2018 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Gm10118-201ENSMUST00000079279 2569 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Clp1Q99LI9 AC155270.1-201ENSMUST00000221626 4028 ntBASIC8.6□□□□□ -1.03
Clp1Q99LI9 AC120425.1-201ENSMUST00000225213 2360 ntBASIC8.6□□□□□ -1.03
Clp1Q99LI9 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Gm25546-201ENSMUST00000103977 132 ntBASIC8.6□□□□□ -1.03
Clp1Q99LI9 Gm14099-201ENSMUST00000117769 605 ntBASIC8.6□□□□□ -1.03
Clp1Q99LI9 Gm12642-201ENSMUST00000121098 876 ntBASIC8.6□□□□□ -1.03
Clp1Q99LI9 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Gm16363-201ENSMUST00000132460 877 ntBASIC8.6□□□□□ -1.03
Clp1Q99LI9 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Gm26942-201ENSMUST00000182854 797 ntBASIC8.6□□□□□ -1.03
Clp1Q99LI9 Gm27864-201ENSMUST00000183704 190 ntBASIC8.6□□□□□ -1.03
Clp1Q99LI9 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Gm37543-201ENSMUST00000192443 1031 ntBASIC8.6□□□□□ -1.03
Clp1Q99LI9 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC8.6□□□□□ -1.03
Clp1Q99LI9 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Gm39121-201ENSMUST00000208847 525 ntBASIC8.6□□□□□ -1.03
Clp1Q99LI9 Gm45319-201ENSMUST00000210220 318 ntBASIC8.6□□□□□ -1.03
Clp1Q99LI9 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Clp1Q99LI9 AC164550.1-201ENSMUST00000217821 1066 ntBASIC8.6□□□□□ -1.03
Clp1Q99LI9 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Gm18503-201ENSMUST00000220340 728 ntBASIC8.6□□□□□ -1.03
Clp1Q99LI9 AC126805.1-201ENSMUST00000225142 262 ntBASIC8.6□□□□□ -1.03
Clp1Q99LI9 AC138604.2-201ENSMUST00000226620 921 ntBASIC8.6□□□□□ -1.03
Clp1Q99LI9 AC124709.1-201ENSMUST00000227296 620 ntBASIC8.6□□□□□ -1.03
Clp1Q99LI9 AC139209.2-201ENSMUST00000227680 1208 ntBASIC8.6□□□□□ -1.03
Clp1Q99LI9 AC125464.1-201ENSMUST00000228013 512 ntBASIC8.6□□□□□ -1.03
Clp1Q99LI9 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC8.6□□□□□ -1.03
Clp1Q99LI9 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Chd8-212ENSMUST00000200169 8509 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Il1rl2-201ENSMUST00000095020 1950 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Baz2a-208ENSMUST00000220049 8443 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Cpeb1os1-201ENSMUST00000207156 2112 ntBASIC8.6□□□□□ -1.03
Clp1Q99LI9 Gm37039-201ENSMUST00000193733 2485 ntBASIC8.6□□□□□ -1.03
Clp1Q99LI9 Zscan26-202ENSMUST00000110485 4366 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Lpin1-202ENSMUST00000111067 5433 ntAPPRIS P4 TSL 1 (best) BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Zfp607b-201ENSMUST00000076421 1947 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Sox5-204ENSMUST00000111748 1734 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Taf1-202ENSMUST00000118878 7210 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Gm37069-201ENSMUST00000192742 4142 ntBASIC8.6□□□□□ -1.03
Clp1Q99LI9 Gm19210-201ENSMUST00000199562 1350 ntBASIC8.6□□□□□ -1.03
Clp1Q99LI9 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Gm42847-201ENSMUST00000201732 2553 ntBASIC8.6□□□□□ -1.03
Clp1Q99LI9 Muc6-201ENSMUST00000062451 8650 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Clp1Q99LI9 Egf-209ENSMUST00000199615 3211 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Ptprc-207ENSMUST00000183301 5074 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Luzp1-203ENSMUST00000105849 7438 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Tbc1d14-221ENSMUST00000171385 3884 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Phc1-201ENSMUST00000079560 3839 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Zfp84-201ENSMUST00000032802 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Gm43323-201ENSMUST00000202328 4258 ntBASIC8.59□□□□□ -1.03
Clp1Q99LI9 Rai14-201ENSMUST00000090339 4909 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Unc93a-201ENSMUST00000084966 2643 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Slc25a13-201ENSMUST00000015256 3067 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Ak7-201ENSMUST00000040876 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Gm45821-201ENSMUST00000211967 1757 ntTSL 5 BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Rnf141-209ENSMUST00000177236 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Bag6-211ENSMUST00000173550 3536 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Gm13463-201ENSMUST00000119020 233 ntBASIC8.59□□□□□ -1.03
Clp1Q99LI9 Gm14788-201ENSMUST00000119457 375 ntBASIC8.59□□□□□ -1.03
Clp1Q99LI9 Gm13633-201ENSMUST00000120668 898 ntBASIC8.59□□□□□ -1.03
Clp1Q99LI9 Gm12455-201ENSMUST00000121242 416 ntBASIC8.59□□□□□ -1.03
Clp1Q99LI9 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Gm9697-201ENSMUST00000147052 997 ntBASIC8.59□□□□□ -1.03
Clp1Q99LI9 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Gm4835-201ENSMUST00000155839 972 ntBASIC8.59□□□□□ -1.03
Clp1Q99LI9 Gm22035-201ENSMUST00000157284 228 ntBASIC8.59□□□□□ -1.03
Clp1Q99LI9 Gm26184-201ENSMUST00000157686 131 ntBASIC8.59□□□□□ -1.03
Clp1Q99LI9 Scarna17-201ENSMUST00000158064 79 ntBASIC8.59□□□□□ -1.03
Clp1Q99LI9 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Gm18416-201ENSMUST00000175635 1003 ntBASIC8.59□□□□□ -1.03
Clp1Q99LI9 Mir8099-2-201ENSMUST00000183568 127 ntBASIC8.59□□□□□ -1.03
Clp1Q99LI9 Mir8099-1-201ENSMUST00000184238 127 ntBASIC8.59□□□□□ -1.03
Clp1Q99LI9 Gm27595-201ENSMUST00000184579 112 ntBASIC8.59□□□□□ -1.03
Clp1Q99LI9 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC8.59□□□□□ -1.03
Clp1Q99LI9 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Gm28507-201ENSMUST00000189737 703 ntBASIC8.59□□□□□ -1.03
Clp1Q99LI9 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC8.59□□□□□ -1.03
Clp1Q99LI9 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC8.59□□□□□ -1.03
Clp1Q99LI9 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Gm44665-201ENSMUST00000205381 251 ntBASIC8.59□□□□□ -1.03
Clp1Q99LI9 Olfr1422-ps1-201ENSMUST00000208076 743 ntBASIC8.59□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms