Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm40646-202ENSMUST00000218796 793 ntTSL 5 BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Gm18972-201ENSMUST00000218873 630 ntBASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Olfr139-201ENSMUST00000050678 948 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Gm24143-201ENSMUST00000082633 145 ntBASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Klk1b3-201ENSMUST00000085450 889 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Gm44509-201ENSMUST00000205400 1324 ntBASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Gm20731-201ENSMUST00000193462 2288 ntBASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Gm43229-201ENSMUST00000201812 1850 ntBASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Gm42973-201ENSMUST00000197913 3200 ntBASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 AC154642.2-201ENSMUST00000223657 2485 ntBASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 AC158605.3-201ENSMUST00000218999 2538 ntBASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Gm12445-201ENSMUST00000117947 885 ntBASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Gm6382-201ENSMUST00000118873 942 ntBASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Gm11907-201ENSMUST00000118918 1007 ntBASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Gm11416-201ENSMUST00000119111 863 ntBASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Gm14339-201ENSMUST00000146224 423 ntTSL 2 BASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Gm25266-201ENSMUST00000158521 304 ntBASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Gm9286-201ENSMUST00000173586 508 ntBASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Gm27675-201ENSMUST00000184527 94 ntBASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Gm29126-201ENSMUST00000188686 151 ntBASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Gm29562-201ENSMUST00000190113 904 ntBASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Gm28492-201ENSMUST00000190899 1019 ntBASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Cnih4-205ENSMUST00000193907 531 ntTSL 2 BASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Gm43815-201ENSMUST00000197676 990 ntBASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Gm9354-201ENSMUST00000209075 468 ntBASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 AV026068-218ENSMUST00000223980 575 ntBASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 AV026068-225ENSMUST00000225042 490 ntBASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 AC135119.1-202ENSMUST00000228435 2203 ntBASIC8.44□□□□□ -1.06
Ccdc38Q8CDN8 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Gm7785-201ENSMUST00000117121 892 ntBASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Gm13915-201ENSMUST00000119314 931 ntBASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Gm17122-201ENSMUST00000166047 372 ntTSL 5 BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Gm7031-201ENSMUST00000173709 919 ntBASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 1700096J18Rik-201ENSMUST00000190043 482 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Gm23011-202ENSMUST00000197855 275 ntBASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Gm30708-201ENSMUST00000202183 312 ntBASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 AC155934.1-201ENSMUST00000213802 322 ntTSL 5 BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Gm8836-201ENSMUST00000198196 1348 ntBASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Gm44746-201ENSMUST00000205565 1349 ntBASIC8.43□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms