Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm44245-201ENSMUST00000204304 232 ntBASIC7.42□□□□□ -1.22
Lrif1Q8CDD9 Spaca7-203ENSMUST00000210276 715 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Lrif1Q8CDD9 Gm4800-201ENSMUST00000215776 1266 ntBASIC7.42□□□□□ -1.22
Lrif1Q8CDD9 AC102689.1-201ENSMUST00000220511 1090 ntBASIC7.42□□□□□ -1.22
Lrif1Q8CDD9 AC124712.1-201ENSMUST00000221833 445 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Lrif1Q8CDD9 Olfr139-201ENSMUST00000050678 948 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Lrif1Q8CDD9 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Lrif1Q8CDD9 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Lrif1Q8CDD9 2310069B03Rik-202ENSMUST00000186147 1833 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Lrif1Q8CDD9 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC7.42□□□□□ -1.22
Lrif1Q8CDD9 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Lrif1Q8CDD9 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Lrif1Q8CDD9 Gm29670-201ENSMUST00000190228 2491 ntBASIC7.42□□□□□ -1.22
Lrif1Q8CDD9 AC166159.1-201ENSMUST00000227154 1380 ntBASIC7.42□□□□□ -1.22
Lrif1Q8CDD9 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Lrif1Q8CDD9 Gm43728-201ENSMUST00000198817 2622 ntBASIC7.42□□□□□ -1.22
Lrif1Q8CDD9 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC7.42□□□□□ -1.22
Lrif1Q8CDD9 Gm15681-201ENSMUST00000137501 2704 ntBASIC7.42□□□□□ -1.22
Lrif1Q8CDD9 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Lrif1Q8CDD9 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Lrif1Q8CDD9 Gm28379-202ENSMUST00000187676 2896 ntBASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Gm6866-201ENSMUST00000188559 2549 ntBASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Gm38009-201ENSMUST00000194884 3341 ntBASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Gm37373-201ENSMUST00000194005 2812 ntBASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Gm37984-201ENSMUST00000191641 3733 ntBASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Gm12838-201ENSMUST00000116278 325 ntBASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Gm12123-201ENSMUST00000120348 472 ntBASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 A630023P12Rik-202ENSMUST00000141420 495 ntTSL 2 BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Gm25266-201ENSMUST00000158521 304 ntBASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Gm17097-201ENSMUST00000166414 714 ntBASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Gm24362-201ENSMUST00000183220 416 ntBASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Gm37800-201ENSMUST00000192129 664 ntTSL 5 BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Gm42977-201ENSMUST00000197497 144 ntBASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Gm43471-201ENSMUST00000197550 467 ntBASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Mir1897-202ENSMUST00000198006 79 ntBASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Gm44285-201ENSMUST00000203557 940 ntBASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Ceacam-ps1-201ENSMUST00000205380 794 ntTSL 2 BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Gm30771-201ENSMUST00000205683 737 ntTSL 3 BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Mcee-204ENSMUST00000206882 391 ntTSL 2 BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Gm18378-201ENSMUST00000216245 628 ntBASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Gm18292-201ENSMUST00000216673 919 ntBASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Rpl7a-ps1-201ENSMUST00000223350 793 ntBASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 AC147096.1-201ENSMUST00000227648 352 ntBASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Gm10805-201ENSMUST00000099710 399 ntBASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Olfr1226-201ENSMUST00000099790 933 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Fv1-201ENSMUST00000094481 1380 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Lrif1Q8CDD9 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC7.4□□□□□ -1.22
Lrif1Q8CDD9 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Lrif1Q8CDD9 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC7.4□□□□□ -1.22
Lrif1Q8CDD9 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Lrif1Q8CDD9 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Lrif1Q8CDD9 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Lrif1Q8CDD9 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
Lrif1Q8CDD9 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC7.4□□□□□ -1.22
Lrif1Q8CDD9 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Lrif1Q8CDD9 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC7.4□□□□□ -1.22
Lrif1Q8CDD9 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Lrif1Q8CDD9 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Lrif1Q8CDD9 Gm26469-201ENSMUST00000116765 121 ntBASIC7.4□□□□□ -1.22
Lrif1Q8CDD9 Gm7785-201ENSMUST00000117121 892 ntBASIC7.4□□□□□ -1.22
Lrif1Q8CDD9 Gm7831-201ENSMUST00000117990 552 ntBASIC7.4□□□□□ -1.22
Lrif1Q8CDD9 Gm14528-201ENSMUST00000120615 231 ntBASIC7.4□□□□□ -1.22
Lrif1Q8CDD9 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC7.4□□□□□ -1.22
Lrif1Q8CDD9 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC7.4□□□□□ -1.22
Lrif1Q8CDD9 Gm7162-201ENSMUST00000161205 1024 ntBASIC7.4□□□□□ -1.22
Lrif1Q8CDD9 Zfp661-204ENSMUST00000164551 1284 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
Lrif1Q8CDD9 Gm5698-201ENSMUST00000178317 724 ntBASIC7.4□□□□□ -1.22
Lrif1Q8CDD9 Mir6403-201ENSMUST00000185007 129 ntBASIC7.4□□□□□ -1.22
Lrif1Q8CDD9 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Lrif1Q8CDD9 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Lrif1Q8CDD9 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC7.4□□□□□ -1.22
Lrif1Q8CDD9 Gm28546-201ENSMUST00000188221 615 ntBASIC7.4□□□□□ -1.22
Lrif1Q8CDD9 Gm28193-201ENSMUST00000189863 615 ntBASIC7.4□□□□□ -1.22
Lrif1Q8CDD9 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC7.4□□□□□ -1.22
Lrif1Q8CDD9 Gm42861-201ENSMUST00000199596 634 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms