Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdx4Q07424 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdx4Q07424 Asb17-201ENSMUST00000044089 2553 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdx4Q07424 Gm33533-201ENSMUST00000193853 1633 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdx4Q07424 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Cdx4Q07424 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdx4Q07424 Gm42576-201ENSMUST00000202336 2846 ntBASIC6.03□□□□□ -1.44
Cdx4Q07424 Retreg1-205ENSMUST00000227275 3200 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Cdx4Q07424 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Cdx4Q07424 Gm4451-201ENSMUST00000186000 1891 ntBASIC6.02□□□□□ -1.44
Cdx4Q07424 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.44
Cdx4Q07424 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm42679-201ENSMUST00000197086 2906 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cdx4Q07424 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cdx4Q07424 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cdx4Q07424 Ipcef1-201ENSMUST00000078070 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdx4Q07424 Kctd16-201ENSMUST00000091927 1349 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdx4Q07424 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
Cdx4Q07424 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Cdx4Q07424 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdx4Q07424 Gc-201ENSMUST00000049209 1801 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm43544-201ENSMUST00000196474 2472 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Fbxw10-201ENSMUST00000036085 3354 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Cdx4Q07424 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cdx4Q07424 Ints4-201ENSMUST00000026126 3240 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdx4Q07424 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdx4Q07424 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Cdx4Q07424 Mir466f-3-201ENSMUST00000104788 94 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdx4Q07424 1700015F17Rik-201ENSMUST00000115447 710 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm14833-201ENSMUST00000118345 1027 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm11877-201ENSMUST00000118921 852 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm15741-201ENSMUST00000119401 754 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Bambi-ps1-201ENSMUST00000121525 592 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 BC002163-201ENSMUST00000121906 319 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm25320-201ENSMUST00000122551 324 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC6.02□□□□□ -1.45
Cdx4Q07424 Crem-218ENSMUST00000139537 807 ntTSL 2 BASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm23027-201ENSMUST00000158771 158 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Esd-ps-201ENSMUST00000170684 847 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm20627-202ENSMUST00000176275 564 ntTSL 5 BASIC6.02□□□□□ -1.45
Cdx4Q07424 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC6.02□□□□□ -1.45
Cdx4Q07424 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm6750-201ENSMUST00000189273 268 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm29664-201ENSMUST00000191125 463 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm37800-201ENSMUST00000192129 664 ntTSL 5 BASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm8407-201ENSMUST00000192719 427 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cdx4Q07424 Prkar2a-206ENSMUST00000195405 1143 ntTSL 5 BASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm43743-201ENSMUST00000197898 697 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm17977-201ENSMUST00000198743 574 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm44353-201ENSMUST00000200618 138 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm44285-201ENSMUST00000203557 940 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm5307-201ENSMUST00000204772 760 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm17838-201ENSMUST00000205872 876 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Mcee-204ENSMUST00000206882 391 ntTSL 2 BASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm39121-201ENSMUST00000208847 525 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Spaca7-203ENSMUST00000210276 715 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Cdx4Q07424 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdx4Q07424 AC132587.1-201ENSMUST00000220562 166 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 AC101831.1-201ENSMUST00000228245 691 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm7086-202ENSMUST00000228849 506 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdx4Q07424 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Cdx4Q07424 Olfr1449-201ENSMUST00000056005 948 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm6807-201ENSMUST00000077435 888 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm7493-201ENSMUST00000085919 626 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Rpl21-ps5-201ENSMUST00000095940 483 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Plac8-202ENSMUST00000097437 738 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm37364-201ENSMUST00000192533 3920 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cdx4Q07424 Adgrf4-204ENSMUST00000170723 2751 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdx4Q07424 Wdr27-206ENSMUST00000228330 2759 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Cdx4Q07424 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cdx4Q07424 Brdt-202ENSMUST00000112677 1607 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm26831-201ENSMUST00000181458 1380 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm43519-201ENSMUST00000197239 1872 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Cdx4Q07424 Olfr1115-203ENSMUST00000214119 2455 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Cdx4Q07424 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdx4Q07424 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdx4Q07424 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdx4Q07424 Gm18632-201ENSMUST00000222597 2087 ntBASIC6.02□□□□□ -1.45
Cdx4Q07424 Cxcl5-201ENSMUST00000031318 1575 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Cdx4Q07424 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cdx4Q07424 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdx4Q07424 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdx4Q07424 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC6.01□□□□□ -1.45
Cdx4Q07424 Fgg-201ENSMUST00000048486 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdx4Q07424 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdx4Q07424 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cdx4Q07424 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Cdx4Q07424 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cdx4Q07424 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms