Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Dock1-201ENSMUST00000084488 6807 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Sox1P53783 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC8.27□□□□□ -1.09
Sox1P53783 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Sox1P53783 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.09
Sox1P53783 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Sox1P53783 Gm13423-201ENSMUST00000117205 888 ntBASIC8.27□□□□□ -1.09
Sox1P53783 Gm11433-201ENSMUST00000118318 228 ntBASIC8.27□□□□□ -1.09
Sox1P53783 Gm2288-201ENSMUST00000118560 638 ntBASIC8.27□□□□□ -1.09
Sox1P53783 Gm14975-201ENSMUST00000118741 664 ntBASIC8.27□□□□□ -1.09
Sox1P53783 Gm13521-201ENSMUST00000118922 866 ntBASIC8.27□□□□□ -1.09
Sox1P53783 Gm12577-201ENSMUST00000119701 574 ntBASIC8.27□□□□□ -1.09
Sox1P53783 Gm8916-201ENSMUST00000119732 949 ntBASIC8.27□□□□□ -1.09
Sox1P53783 Gm14528-201ENSMUST00000120615 231 ntBASIC8.27□□□□□ -1.09
Sox1P53783 Gm11609-201ENSMUST00000121926 793 ntBASIC8.27□□□□□ -1.09
Sox1P53783 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Sox1P53783 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Sox1P53783 Gm24748-201ENSMUST00000157836 108 ntBASIC8.27□□□□□ -1.09
Sox1P53783 Gm20452-201ENSMUST00000174686 513 ntBASIC8.27□□□□□ -1.09
Sox1P53783 Mir3473c-201ENSMUST00000175262 81 ntBASIC8.27□□□□□ -1.09
Sox1P53783 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Sox1P53783 Gm28929-201ENSMUST00000185330 1193 ntBASIC8.27□□□□□ -1.09
Sox1P53783 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC8.27□□□□□ -1.09
Sox1P53783 Ccl20-203ENSMUST00000186832 772 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sox1P53783 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Sox1P53783 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Sox1P53783 Gm31306-201ENSMUST00000197517 508 ntBASIC8.27□□□□□ -1.09
Sox1P53783 Gm1969-201ENSMUST00000198125 1220 ntBASIC8.27□□□□□ -1.09
Sox1P53783 Gm42883-201ENSMUST00000202594 222 ntBASIC8.27□□□□□ -1.09
Sox1P53783 Gm44181-201ENSMUST00000203106 483 ntBASIC8.27□□□□□ -1.09
Sox1P53783 Gm9240-201ENSMUST00000206527 742 ntBASIC8.27□□□□□ -1.09
Sox1P53783 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC8.27□□□□□ -1.09
Sox1P53783 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Sox1P53783 AL929555.1-201ENSMUST00000215283 509 ntBASIC8.27□□□□□ -1.09
Sox1P53783 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC8.27□□□□□ -1.09
Sox1P53783 AC134462.1-201ENSMUST00000223047 552 ntTSL 2 BASIC8.27□□□□□ -1.09
Sox1P53783 AC168880.1-201ENSMUST00000225113 707 ntBASIC8.27□□□□□ -1.09
Sox1P53783 AC124196.1-201ENSMUST00000225970 1032 ntBASIC8.27□□□□□ -1.09
Sox1P53783 Reg2-201ENSMUST00000023906 698 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sox1P53783 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Sox1P53783 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Sox1P53783 Lin7a-202ENSMUST00000105280 1634 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Sox1P53783 Pign-210ENSMUST00000190811 3015 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Sox1P53783 Ttc17-204ENSMUST00000111238 4590 ntTSL 5 BASIC8.27□□□□□ -1.09
Sox1P53783 Bag6-211ENSMUST00000173550 3536 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Sox1P53783 Gm18639-201ENSMUST00000210442 1769 ntBASIC8.27□□□□□ -1.09
Sox1P53783 Agbl4-206ENSMUST00000106592 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sox1P53783 Gm9776-201ENSMUST00000059598 2980 ntBASIC8.27□□□□□ -1.09
Sox1P53783 Gm8188-201ENSMUST00000219737 1690 ntBASIC8.27□□□□□ -1.09
Sox1P53783 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC8.27□□□□□ -1.09
Sox1P53783 Fbxo3-203ENSMUST00000111135 3740 ntTSL 5 BASIC8.27□□□□□ -1.09
Sox1P53783 Gm44812-201ENSMUST00000207627 5349 ntTSL 5 BASIC8.27□□□□□ -1.09
Sox1P53783 Tnip3-208ENSMUST00000212402 1577 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Sox1P53783 Aldh7a1-208ENSMUST00000174518 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sox1P53783 Tenm1-201ENSMUST00000016294 8365 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sox1P53783 Jakmip2-201ENSMUST00000082254 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 Rab27a-203ENSMUST00000184146 3168 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 Grb10-203ENSMUST00000109654 4755 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 Helz2-202ENSMUST00000108831 10109 ntAPPRIS P2 TSL 5 BASIC8.26□□□□□ -1.09
Sox1P53783 Immt-201ENSMUST00000064062 2728 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC8.26□□□□□ -1.09
Sox1P53783 Elp3-201ENSMUST00000022609 2851 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 Cfap46-202ENSMUST00000129990 8180 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Sox1P53783 Gm4890-201ENSMUST00000181030 3784 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 Hmgcs2-201ENSMUST00000090746 3290 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 Paqr8-204ENSMUST00000189400 5330 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC8.26□□□□□ -1.09
Sox1P53783 Trmt13-201ENSMUST00000041524 3402 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 Nol11-201ENSMUST00000018577 3158 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC8.26□□□□□ -1.09
Sox1P53783 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC8.26□□□□□ -1.09
Sox1P53783 Gm15596-201ENSMUST00000121139 784 ntBASIC8.26□□□□□ -1.09
Sox1P53783 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
Sox1P53783 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 Gm6004-201ENSMUST00000173237 1116 ntBASIC8.26□□□□□ -1.09
Sox1P53783 Gm8321-201ENSMUST00000181691 980 ntBASIC8.26□□□□□ -1.09
Sox1P53783 Gm8183-201ENSMUST00000183134 980 ntBASIC8.26□□□□□ -1.09
Sox1P53783 Mir8120-201ENSMUST00000185035 139 ntBASIC8.26□□□□□ -1.09
Sox1P53783 Gm27458-201ENSMUST00000185108 121 ntBASIC8.26□□□□□ -1.09
Sox1P53783 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC8.26□□□□□ -1.09
Sox1P53783 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC8.26□□□□□ -1.09
Sox1P53783 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC8.26□□□□□ -1.09
Sox1P53783 Gm28648-201ENSMUST00000190092 343 ntBASIC8.26□□□□□ -1.09
Sox1P53783 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC8.26□□□□□ -1.09
Sox1P53783 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC8.26□□□□□ -1.09
Sox1P53783 1700113B19Rik-201ENSMUST00000191817 420 ntBASIC8.26□□□□□ -1.09
Sox1P53783 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC8.26□□□□□ -1.09
Sox1P53783 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC8.26□□□□□ -1.09
Sox1P53783 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC8.26□□□□□ -1.09
Sox1P53783 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC8.26□□□□□ -1.09
Sox1P53783 Gm8637-201ENSMUST00000212919 1085 ntBASIC8.26□□□□□ -1.09
Sox1P53783 Gm9267-201ENSMUST00000222831 404 ntBASIC8.26□□□□□ -1.09
Sox1P53783 Mtmr6-201ENSMUST00000022563 3813 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms