Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC9.83□□□□□ -0.84
Col18a1P39061 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC9.83□□□□□ -0.84
Col18a1P39061 Gm36758-201ENSMUST00000222594 310 ntBASIC9.83□□□□□ -0.84
Col18a1P39061 Gm6575-201ENSMUST00000222946 697 ntBASIC9.83□□□□□ -0.84
Col18a1P39061 Zfp850-201ENSMUST00000099111 941 ntBASIC9.83□□□□□ -0.84
Col18a1P39061 Olfr32-201ENSMUST00000099755 1016 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Col18a1P39061 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Col18a1P39061 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Col18a1P39061 Rab7b-202ENSMUST00000064679 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col18a1P39061 Gm37326-201ENSMUST00000192828 3071 ntBASIC9.83□□□□□ -0.84
Col18a1P39061 Tagap-201ENSMUST00000036370 3076 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col18a1P39061 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Col18a1P39061 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col18a1P39061 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col18a1P39061 Synpo2-201ENSMUST00000051443 3719 ntBASIC9.83□□□□□ -0.84
Col18a1P39061 F10-202ENSMUST00000063820 2503 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col18a1P39061 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col18a1P39061 CT010577.1-202ENSMUST00000226187 1903 ntBASIC9.83□□□□□ -0.84
Col18a1P39061 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Col18a1P39061 Phactr1-205ENSMUST00000128646 5430 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col18a1P39061 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
Col18a1P39061 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC9.83□□□□□ -0.84
Col18a1P39061 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC9.83□□□□□ -0.84
Col18a1P39061 Gm22990-201ENSMUST00000175427 89 ntBASIC9.83□□□□□ -0.84
Col18a1P39061 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC9.83□□□□□ -0.84
Col18a1P39061 Gm18009-201ENSMUST00000203239 1016 ntBASIC9.83□□□□□ -0.84
Col18a1P39061 Gm9367-201ENSMUST00000205703 546 ntBASIC9.83□□□□□ -0.84
Col18a1P39061 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC9.83□□□□□ -0.84
Col18a1P39061 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC9.83□□□□□ -0.84
Col18a1P39061 Gm45185-201ENSMUST00000207556 404 ntBASIC9.83□□□□□ -0.84
Col18a1P39061 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC9.83□□□□□ -0.84
Col18a1P39061 CT025598.1-201ENSMUST00000225140 427 ntBASIC9.83□□□□□ -0.84
Col18a1P39061 AC159205.7-201ENSMUST00000225988 692 ntBASIC9.83□□□□□ -0.84
Col18a1P39061 AC125539.1-202ENSMUST00000226449 670 ntBASIC9.83□□□□□ -0.84
Col18a1P39061 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col18a1P39061 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col18a1P39061 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Col18a1P39061 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col18a1P39061 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Col18a1P39061 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col18a1P39061 Ptprr-201ENSMUST00000063470 3619 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col18a1P39061 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Col18a1P39061 Gm45708-202ENSMUST00000212785 2752 ntTSL 5 BASIC9.83□□□□□ -0.84
Col18a1P39061 AC159264.1-202ENSMUST00000224856 3162 ntBASIC9.82□□□□□ -0.84
Col18a1P39061 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col18a1P39061 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col18a1P39061 4933432K03Rik-203ENSMUST00000206276 2311 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Col18a1P39061 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col18a1P39061 Stk11ip-201ENSMUST00000027414 4458 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col18a1P39061 Srbd1-201ENSMUST00000095187 3530 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Col18a1P39061 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col18a1P39061 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC9.82□□□□□ -0.84
Col18a1P39061 Havcr1-201ENSMUST00000047568 1892 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col18a1P39061 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Col18a1P39061 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col18a1P39061 Lrba-204ENSMUST00000194759 9379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col18a1P39061 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Col18a1P39061 AC124680.1-201ENSMUST00000223923 1585 ntBASIC9.82□□□□□ -0.84
Col18a1P39061 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Col18a1P39061 Gm12740-201ENSMUST00000118794 308 ntBASIC9.82□□□□□ -0.84
Col18a1P39061 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC9.82□□□□□ -0.84
Col18a1P39061 Gm11107-201ENSMUST00000165414 505 ntBASIC9.82□□□□□ -0.84
Col18a1P39061 Gm6558-202ENSMUST00000192046 180 ntTSL 5 BASIC9.82□□□□□ -0.84
Col18a1P39061 Gm18040-201ENSMUST00000217922 827 ntBASIC9.82□□□□□ -0.84
Col18a1P39061 AC132954.2-201ENSMUST00000222400 403 ntBASIC9.82□□□□□ -0.84
Col18a1P39061 AC156574.1-201ENSMUST00000227084 452 ntBASIC9.82□□□□□ -0.84
Col18a1P39061 Cyp1a1-202ENSMUST00000216433 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col18a1P39061 Rpgr-203ENSMUST00000073392 2926 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col18a1P39061 Gm44763-201ENSMUST00000208287 2019 ntBASIC9.82□□□□□ -0.84
Col18a1P39061 Gm15789-201ENSMUST00000118992 1359 ntBASIC9.82□□□□□ -0.84
Col18a1P39061 Gm44280-201ENSMUST00000204498 3111 ntBASIC9.82□□□□□ -0.84
Col18a1P39061 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col18a1P39061 Mrpl15-206ENSMUST00000156816 4203 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col18a1P39061 Xpo5-201ENSMUST00000087031 3709 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col18a1P39061 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Col18a1P39061 Ablim1-203ENSMUST00000104902 5907 ntTSL 5 BASIC9.82□□□□□ -0.84
Col18a1P39061 Pcyt1a-201ENSMUST00000079791 4789 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col18a1P39061 AC122426.2-201ENSMUST00000216522 2947 ntBASIC9.82□□□□□ -0.84
Col18a1P39061 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Col18a1P39061 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Col18a1P39061 Gm26862-201ENSMUST00000181886 2191 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Col18a1P39061 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Col18a1P39061 Prkcz-202ENSMUST00000103178 4083 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col18a1P39061 Ston1-207ENSMUST00000163588 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col18a1P39061 Gm18719-201ENSMUST00000196696 1413 ntBASIC9.81□□□□□ -0.84
Col18a1P39061 5330417C22Rik-201ENSMUST00000048012 3321 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col18a1P39061 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col18a1P39061 AC126251.1-201ENSMUST00000228170 2707 ntBASIC9.81□□□□□ -0.84
Col18a1P39061 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col18a1P39061 Gbp8-201ENSMUST00000031235 2459 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Col18a1P39061 Zfp827-201ENSMUST00000087927 2801 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col18a1P39061 AC168056.4-201ENSMUST00000223835 2567 ntBASIC9.81□□□□□ -0.84
Col18a1P39061 Gm11271-201ENSMUST00000116054 440 ntBASIC9.81□□□□□ -0.84
Col18a1P39061 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col18a1P39061 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col18a1P39061 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col18a1P39061 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col18a1P39061 Gm27849-201ENSMUST00000183673 125 ntBASIC9.81□□□□□ -0.84
Col18a1P39061 Gm37809-201ENSMUST00000195050 931 ntBASIC9.81□□□□□ -0.84
Col18a1P39061 Gm7285-201ENSMUST00000198801 580 ntBASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms