Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Mir3072-201ENSMUST00000175610 83 ntBASIC8.08□□□□□ -1.12
Usp4P35123 Gm2058-201ENSMUST00000178791 560 ntBASIC8.08□□□□□ -1.12
Usp4P35123 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
Usp4P35123 Mir6912-201ENSMUST00000184456 70 ntBASIC8.08□□□□□ -1.12
Usp4P35123 Scgb2b30-201ENSMUST00000187013 336 ntBASIC8.08□□□□□ -1.12
Usp4P35123 Scgb2b10-201ENSMUST00000191403 318 ntBASIC8.08□□□□□ -1.12
Usp4P35123 Gm7369-201ENSMUST00000192738 936 ntBASIC8.08□□□□□ -1.12
Usp4P35123 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC8.08□□□□□ -1.12
Usp4P35123 Gm43928-201ENSMUST00000203737 409 ntBASIC8.08□□□□□ -1.12
Usp4P35123 Gm5586-201ENSMUST00000206264 795 ntBASIC8.08□□□□□ -1.12
Usp4P35123 Gm7972-201ENSMUST00000208434 1137 ntBASIC8.08□□□□□ -1.12
Usp4P35123 Gm4270-201ENSMUST00000209666 406 ntBASIC8.08□□□□□ -1.12
Usp4P35123 Gm45274-201ENSMUST00000209938 647 ntTSL 3 BASIC8.08□□□□□ -1.12
Usp4P35123 Gm18192-201ENSMUST00000210174 941 ntBASIC8.08□□□□□ -1.12
Usp4P35123 Olfr664-202ENSMUST00000211596 921 ntAPPRIS ALT2 BASIC8.08□□□□□ -1.12
Usp4P35123 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC8.08□□□□□ -1.12
Usp4P35123 AC123058.1-201ENSMUST00000223748 437 ntBASIC8.08□□□□□ -1.12
Usp4P35123 AC131710.2-201ENSMUST00000226773 683 ntBASIC8.08□□□□□ -1.12
Usp4P35123 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Usp4P35123 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp4P35123 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp4P35123 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Usp4P35123 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Usp4P35123 Gm7493-201ENSMUST00000085919 626 ntBASIC8.08□□□□□ -1.12
Usp4P35123 Zfp850-201ENSMUST00000099111 941 ntBASIC8.08□□□□□ -1.12
Usp4P35123 Olfr1286-201ENSMUST00000099617 918 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Usp4P35123 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Usp4P35123 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Usp4P35123 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Usp4P35123 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp4P35123 Gm1982-201ENSMUST00000188615 1887 ntBASIC8.08□□□□□ -1.12
Usp4P35123 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
Usp4P35123 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
Usp4P35123 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
Usp4P35123 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Usp4P35123 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Usp4P35123 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp4P35123 Gm15109-201ENSMUST00000133085 2026 ntBASIC8.08□□□□□ -1.12
Usp4P35123 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp4P35123 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Usp4P35123 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp4P35123 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Usp4P35123 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp4P35123 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Usp4P35123 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC8.08□□□□□ -1.12
Usp4P35123 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Usp4P35123 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp4P35123 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Usp4P35123 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC8.08□□□□□ -1.12
Usp4P35123 Gm38262-201ENSMUST00000194760 1382 ntBASIC8.08□□□□□ -1.12
Usp4P35123 Gm42968-201ENSMUST00000198578 1372 ntBASIC8.08□□□□□ -1.12
Usp4P35123 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp4P35123 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp4P35123 Gm43982-201ENSMUST00000204995 1829 ntBASIC8.08□□□□□ -1.12
Usp4P35123 Gm37790-201ENSMUST00000193136 3346 ntBASIC8.08□□□□□ -1.12
Usp4P35123 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp4P35123 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Usp4P35123 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp4P35123 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Usp4P35123 Prb1-201ENSMUST00000087853 1621 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp4P35123 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp4P35123 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp4P35123 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp4P35123 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC8.07□□□□□ -1.12
Usp4P35123 Csnk1g1-209ENSMUST00000205379 4001 ntAPPRIS ALT1 TSL 5 BASIC8.07□□□□□ -1.12
Usp4P35123 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp4P35123 Gm6418-201ENSMUST00000118325 3577 ntBASIC8.07□□□□□ -1.12
Usp4P35123 Gm22271-201ENSMUST00000104035 128 ntBASIC8.07□□□□□ -1.12
Usp4P35123 Gm6181-201ENSMUST00000117187 264 ntBASIC8.07□□□□□ -1.12
Usp4P35123 Gm14584-201ENSMUST00000118956 637 ntBASIC8.07□□□□□ -1.12
Usp4P35123 Gm13059-201ENSMUST00000119881 398 ntBASIC8.07□□□□□ -1.12
Usp4P35123 Gm5883-201ENSMUST00000120735 495 ntBASIC8.07□□□□□ -1.12
Usp4P35123 Gm12870-201ENSMUST00000121383 1016 ntBASIC8.07□□□□□ -1.12
Usp4P35123 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC8.07□□□□□ -1.12
Usp4P35123 Gm13269-201ENSMUST00000143458 655 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Usp4P35123 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC8.07□□□□□ -1.12
Usp4P35123 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Usp4P35123 Gm24899-201ENSMUST00000158892 73 ntBASIC8.07□□□□□ -1.12
Usp4P35123 Gm22094-201ENSMUST00000158976 117 ntBASIC8.07□□□□□ -1.12
Usp4P35123 Gm18301-201ENSMUST00000185261 888 ntBASIC8.07□□□□□ -1.12
Usp4P35123 Gm8641-201ENSMUST00000186995 826 ntBASIC8.07□□□□□ -1.12
Usp4P35123 Gm28583-201ENSMUST00000188903 2141 ntBASIC8.07□□□□□ -1.12
Usp4P35123 1700096J18Rik-201ENSMUST00000190043 482 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Usp4P35123 I830127L07Rik-202ENSMUST00000190944 405 ntBASIC8.07□□□□□ -1.12
Usp4P35123 Ighv1-38-201ENSMUST00000192755 349 ntBASIC8.07□□□□□ -1.12
Usp4P35123 Gm37623-201ENSMUST00000193691 803 ntTSL 3 BASIC8.07□□□□□ -1.12
Usp4P35123 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC8.07□□□□□ -1.12
Usp4P35123 Gm42977-201ENSMUST00000197497 144 ntBASIC8.07□□□□□ -1.12
Usp4P35123 Gm31243-202ENSMUST00000198354 628 ntTSL 3 BASIC8.07□□□□□ -1.12
Usp4P35123 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Usp4P35123 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC8.07□□□□□ -1.12
Usp4P35123 AC241621.1-201ENSMUST00000224499 430 ntBASIC8.07□□□□□ -1.12
Usp4P35123 AC131117.1-201ENSMUST00000225154 1171 ntBASIC8.07□□□□□ -1.12
Usp4P35123 AC140209.1-201ENSMUST00000227875 284 ntBASIC8.07□□□□□ -1.12
Usp4P35123 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp4P35123 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Usp4P35123 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Usp4P35123 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp4P35123 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp4P35123 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms