Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC7.43□□□□□ -1.22
BdnfP21237 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
BdnfP21237 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
BdnfP21237 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
BdnfP21237 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
BdnfP21237 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
BdnfP21237 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
BdnfP21237 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
BdnfP21237 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC7.43□□□□□ -1.22
BdnfP21237 Gm19028-201ENSMUST00000189614 1873 ntBASIC7.43□□□□□ -1.22
BdnfP21237 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC7.43□□□□□ -1.22
BdnfP21237 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
BdnfP21237 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
BdnfP21237 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC7.42□□□□□ -1.22
BdnfP21237 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
BdnfP21237 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC7.42□□□□□ -1.22
BdnfP21237 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
BdnfP21237 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
BdnfP21237 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
BdnfP21237 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
BdnfP21237 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
BdnfP21237 Gm46199-201ENSMUST00000220373 1693 ntBASIC7.42□□□□□ -1.22
BdnfP21237 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC7.42□□□□□ -1.22
BdnfP21237 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
BdnfP21237 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
BdnfP21237 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
BdnfP21237 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC7.42□□□□□ -1.22
BdnfP21237 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
BdnfP21237 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
BdnfP21237 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
BdnfP21237 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
BdnfP21237 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC7.42□□□□□ -1.22
BdnfP21237 Gm9392-201ENSMUST00000119337 554 ntBASIC7.42□□□□□ -1.22
BdnfP21237 Gm25780-201ENSMUST00000122528 253 ntBASIC7.42□□□□□ -1.22
BdnfP21237 Gm8988-201ENSMUST00000155015 1240 ntBASIC7.42□□□□□ -1.22
BdnfP21237 Gm8813-201ENSMUST00000155930 595 ntBASIC7.42□□□□□ -1.22
BdnfP21237 Gm23082-201ENSMUST00000157852 133 ntBASIC7.42□□□□□ -1.22
BdnfP21237 Gm24083-201ENSMUST00000175174 120 ntBASIC7.42□□□□□ -1.22
BdnfP21237 Gm5839-201ENSMUST00000182835 1007 ntBASIC7.42□□□□□ -1.22
BdnfP21237 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC7.42□□□□□ -1.22
BdnfP21237 Gm29356-201ENSMUST00000186935 373 ntBASIC7.42□□□□□ -1.22
BdnfP21237 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
BdnfP21237 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
BdnfP21237 Gm42667-201ENSMUST00000196132 234 ntBASIC7.42□□□□□ -1.22
BdnfP21237 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC7.42□□□□□ -1.22
BdnfP21237 Gm5857-201ENSMUST00000198953 493 ntBASIC7.42□□□□□ -1.22
BdnfP21237 Gm44725-201ENSMUST00000205307 391 ntTSL 5 BASIC7.42□□□□□ -1.22
BdnfP21237 Gm44588-201ENSMUST00000208401 545 ntTSL 5 BASIC7.42□□□□□ -1.22
BdnfP21237 Gm45475-201ENSMUST00000209381 309 ntBASIC7.42□□□□□ -1.22
BdnfP21237 Gm3774-201ENSMUST00000209773 435 ntBASIC7.42□□□□□ -1.22
BdnfP21237 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
BdnfP21237 AC158531.2-201ENSMUST00000224264 473 ntBASIC7.42□□□□□ -1.22
BdnfP21237 AC241621.1-201ENSMUST00000224499 430 ntBASIC7.42□□□□□ -1.22
BdnfP21237 AC146601.1-201ENSMUST00000227910 905 ntBASIC7.42□□□□□ -1.22
BdnfP21237 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
BdnfP21237 Rasgrf1-201ENSMUST00000034909 853 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
BdnfP21237 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
BdnfP21237 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC7.42□□□□□ -1.22
BdnfP21237 1700011H14Rik-201ENSMUST00000022398 1349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
BdnfP21237 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
BdnfP21237 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
BdnfP21237 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
BdnfP21237 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
BdnfP21237 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC7.42□□□□□ -1.22
BdnfP21237 AC168056.3-201ENSMUST00000225395 2540 ntBASIC7.42□□□□□ -1.22
BdnfP21237 1700095J07Rik-201ENSMUST00000128017 1405 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
BdnfP21237 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
BdnfP21237 Gm37470-201ENSMUST00000193378 2798 ntBASIC7.42□□□□□ -1.22
BdnfP21237 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
BdnfP21237 Olfr212-202ENSMUST00000218028 2291 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
BdnfP21237 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
BdnfP21237 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC7.41□□□□□ -1.22
BdnfP21237 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
BdnfP21237 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
BdnfP21237 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC7.41□□□□□ -1.22
BdnfP21237 Ighv1-9-201ENSMUST00000103498 348 ntAPPRIS ALT2 BASIC7.41□□□□□ -1.22
BdnfP21237 Ap5s1-202ENSMUST00000110206 703 ntTSL 3 BASIC7.41□□□□□ -1.22
BdnfP21237 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
BdnfP21237 Gm11951-201ENSMUST00000116005 431 ntBASIC7.41□□□□□ -1.22
BdnfP21237 Gm13352-201ENSMUST00000117515 262 ntBASIC7.41□□□□□ -1.22
BdnfP21237 Gm12883-201ENSMUST00000117867 364 ntBASIC7.41□□□□□ -1.22
BdnfP21237 Gm13526-201ENSMUST00000117970 189 ntBASIC7.41□□□□□ -1.22
BdnfP21237 Gm5761-201ENSMUST00000119238 834 ntBASIC7.41□□□□□ -1.22
BdnfP21237 Gm15763-201ENSMUST00000120136 403 ntBASIC7.41□□□□□ -1.22
BdnfP21237 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
BdnfP21237 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
BdnfP21237 Gm16554-201ENSMUST00000159471 460 ntTSL 3 BASIC7.41□□□□□ -1.22
BdnfP21237 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
BdnfP21237 Gm3002-202ENSMUST00000178256 444 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
BdnfP21237 Gm2974-202ENSMUST00000180184 447 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
BdnfP21237 Gm21013-201ENSMUST00000184952 1201 ntBASIC7.41□□□□□ -1.22
BdnfP21237 Gm28983-201ENSMUST00000186685 614 ntBASIC7.41□□□□□ -1.22
BdnfP21237 Gm28150-201ENSMUST00000187305 614 ntBASIC7.41□□□□□ -1.22
BdnfP21237 Gm28377-201ENSMUST00000189695 720 ntBASIC7.41□□□□□ -1.22
BdnfP21237 Gm3142-201ENSMUST00000190107 414 ntBASIC7.41□□□□□ -1.22
BdnfP21237 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC7.41□□□□□ -1.22
BdnfP21237 Gm37966-201ENSMUST00000193122 326 ntBASIC7.41□□□□□ -1.22
BdnfP21237 Gm37185-201ENSMUST00000193852 410 ntBASIC7.41□□□□□ -1.22
BdnfP21237 Gm43310-201ENSMUST00000198975 820 ntBASIC7.41□□□□□ -1.22
BdnfP21237 2510016D11Rik-201ENSMUST00000201971 985 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 102.6 ms