Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC6.02□□□□□ -1.45
Sdc1P18828 Gm5717-201ENSMUST00000198243 1062 ntBASIC6.02□□□□□ -1.45
Sdc1P18828 Gm30301-201ENSMUST00000199474 652 ntTSL 5 BASIC6.02□□□□□ -1.45
Sdc1P18828 Gm43837-201ENSMUST00000200306 668 ntTSL 5 BASIC6.02□□□□□ -1.45
Sdc1P18828 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sdc1P18828 Gm30781-201ENSMUST00000204743 216 ntTSL 5 BASIC6.02□□□□□ -1.45
Sdc1P18828 Gm44659-201ENSMUST00000207269 436 ntTSL 2 BASIC6.02□□□□□ -1.45
Sdc1P18828 4833412C05Rik-202ENSMUST00000208257 850 ntTSL 3 BASIC6.02□□□□□ -1.45
Sdc1P18828 Gm44714-201ENSMUST00000208665 657 ntTSL 3 BASIC6.02□□□□□ -1.45
Sdc1P18828 Olfr61-204ENSMUST00000211685 1212 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Sdc1P18828 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC6.02□□□□□ -1.45
Sdc1P18828 Gm5080-201ENSMUST00000220341 743 ntBASIC6.02□□□□□ -1.45
Sdc1P18828 AC207128.2-202ENSMUST00000224010 808 ntBASIC6.02□□□□□ -1.45
Sdc1P18828 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
Sdc1P18828 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
Sdc1P18828 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC6.02□□□□□ -1.45
Sdc1P18828 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sdc1P18828 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Sdc1P18828 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sdc1P18828 Gm13456-201ENSMUST00000118928 1365 ntBASIC6.02□□□□□ -1.45
Sdc1P18828 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sdc1P18828 Gm20539-201ENSMUST00000174811 1384 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sdc1P18828 Gm38082-201ENSMUST00000192800 6882 ntBASIC6.02□□□□□ -1.45
Sdc1P18828 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sdc1P18828 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sdc1P18828 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC6.02□□□□□ -1.45
Sdc1P18828 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sdc1P18828 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sdc1P18828 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sdc1P18828 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sdc1P18828 Gm14035-201ENSMUST00000117596 1475 ntBASIC6.02□□□□□ -1.45
Sdc1P18828 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sdc1P18828 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.02□□□□□ -1.45
Sdc1P18828 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
Sdc1P18828 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sdc1P18828 AC158115.1-201ENSMUST00000222830 3182 ntBASIC6.02□□□□□ -1.45
Sdc1P18828 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sdc1P18828 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.02□□□□□ -1.45
Sdc1P18828 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sdc1P18828 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sdc1P18828 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sdc1P18828 Gm28667-201ENSMUST00000189873 2171 ntBASIC6.01□□□□□ -1.45
Sdc1P18828 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC6.01□□□□□ -1.45
Sdc1P18828 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sdc1P18828 Gm6494-201ENSMUST00000218604 2298 ntBASIC6.01□□□□□ -1.45
Sdc1P18828 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Sdc1P18828 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sdc1P18828 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC6.01□□□□□ -1.45
Sdc1P18828 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Sdc1P18828 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sdc1P18828 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Sdc1P18828 Gm37410-201ENSMUST00000193623 3039 ntBASIC6.01□□□□□ -1.45
Sdc1P18828 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Sdc1P18828 n-R5s72-201ENSMUST00000104518 119 ntBASIC6.01□□□□□ -1.45
Sdc1P18828 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC6.01□□□□□ -1.45
Sdc1P18828 Gm4911-201ENSMUST00000119388 945 ntBASIC6.01□□□□□ -1.45
Sdc1P18828 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC6.01□□□□□ -1.45
Sdc1P18828 Gm14796-201ENSMUST00000121216 959 ntBASIC6.01□□□□□ -1.45
Sdc1P18828 Gm12064-201ENSMUST00000133819 533 ntTSL 3 BASIC6.01□□□□□ -1.45
Sdc1P18828 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC6.01□□□□□ -1.45
Sdc1P18828 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sdc1P18828 Gm25154-201ENSMUST00000157123 119 ntBASIC6.01□□□□□ -1.45
Sdc1P18828 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC6.01□□□□□ -1.45
Sdc1P18828 1700092M07Rik-201ENSMUST00000163172 380 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sdc1P18828 Gm17053-201ENSMUST00000163501 495 ntBASIC6.01□□□□□ -1.45
Sdc1P18828 Nup37-202ENSMUST00000169309 1277 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sdc1P18828 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Sdc1P18828 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC6.01□□□□□ -1.45
Sdc1P18828 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Sdc1P18828 Fendrr-201ENSMUST00000181231 1092 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sdc1P18828 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC6.01□□□□□ -1.45
Sdc1P18828 Mef2c-219ENSMUST00000198217 1257 ntTSL 5 BASIC6.01□□□□□ -1.45
Sdc1P18828 Mef2c-225ENSMUST00000199210 1185 ntTSL 5 BASIC6.01□□□□□ -1.45
Sdc1P18828 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.01□□□□□ -1.45
Sdc1P18828 Gm44778-201ENSMUST00000206447 668 ntTSL 3 BASIC6.01□□□□□ -1.45
Sdc1P18828 Gm45625-201ENSMUST00000209412 650 ntTSL 5 BASIC6.01□□□□□ -1.45
Sdc1P18828 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC6.01□□□□□ -1.45
Sdc1P18828 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC6.01□□□□□ -1.45
Sdc1P18828 Arhgef33-210ENSMUST00000225548 456 ntBASIC6.01□□□□□ -1.45
Sdc1P18828 AC122309.1-201ENSMUST00000226945 421 ntBASIC6.01□□□□□ -1.45
Sdc1P18828 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Sdc1P18828 Gm23458-201ENSMUST00000083257 169 ntBASIC6.01□□□□□ -1.45
Sdc1P18828 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Sdc1P18828 Gm10689-201ENSMUST00000098864 432 ntBASIC6.01□□□□□ -1.45
Sdc1P18828 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Sdc1P18828 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sdc1P18828 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sdc1P18828 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sdc1P18828 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Sdc1P18828 AC138765.2-202ENSMUST00000228418 3435 ntBASIC6.01□□□□□ -1.45
Sdc1P18828 Gm37474-201ENSMUST00000194812 1814 ntBASIC6.01□□□□□ -1.45
Sdc1P18828 Gm12346-201ENSMUST00000121455 2255 ntBASIC6.01□□□□□ -1.45
Sdc1P18828 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Sdc1P18828 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sdc1P18828 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Sdc1P18828 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sdc1P18828 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sdc1P18828 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6□□□□□ -1.45
Sdc1P18828 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Sdc1P18828 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms