Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm20276-201ENSMUST00000216122 2648 ntBASIC6.16□□□□□ -1.42
Cdx1P18111 Clec12b-202ENSMUST00000112082 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx1P18111 Gm11239-201ENSMUST00000171348 1322 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Cdx1P18111 Gm11237-201ENSMUST00000178319 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx1P18111 Gm11236-201ENSMUST00000180092 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx1P18111 Gm428-201ENSMUST00000084475 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx1P18111 Gm11238-201ENSMUST00000084479 1323 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Cdx1P18111 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx1P18111 Olfr1497-202ENSMUST00000217384 1672 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Cdx1P18111 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC6.16□□□□□ -1.42
Cdx1P18111 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx1P18111 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Cdx1P18111 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Cdx1P18111 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC6.16□□□□□ -1.42
Cdx1P18111 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx1P18111 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx1P18111 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Cdx1P18111 Nprl2-201ENSMUST00000010201 1441 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx1P18111 Ms4a6d-201ENSMUST00000025582 1418 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx1P18111 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx1P18111 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx1P18111 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx1P18111 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx1P18111 Gm38105-201ENSMUST00000192112 2621 ntBASIC6.15□□□□□ -1.42
Cdx1P18111 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx1P18111 Gm21043-201ENSMUST00000199316 1517 ntBASIC6.15□□□□□ -1.42
Cdx1P18111 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC6.15□□□□□ -1.42
Cdx1P18111 Cldn12-203ENSMUST00000115446 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx1P18111 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC6.15□□□□□ -1.42
Cdx1P18111 Gm6640-201ENSMUST00000120629 1587 ntBASIC6.15□□□□□ -1.42
Cdx1P18111 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx1P18111 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC6.15□□□□□ -1.42
Cdx1P18111 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx1P18111 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx1P18111 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Cdx1P18111 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC6.15□□□□□ -1.42
Cdx1P18111 Gm44550-201ENSMUST00000207311 2058 ntBASIC6.15□□□□□ -1.42
Cdx1P18111 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx1P18111 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx1P18111 Igkv4-72-201ENSMUST00000103346 402 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Cdx1P18111 Ghrh-202ENSMUST00000109536 503 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx1P18111 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx1P18111 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx1P18111 Gm2214-201ENSMUST00000121333 330 ntBASIC6.15□□□□□ -1.42
Cdx1P18111 Gm15928-201ENSMUST00000122455 280 ntBASIC6.15□□□□□ -1.42
Cdx1P18111 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx1P18111 Gm6706-201ENSMUST00000145087 318 ntBASIC6.15□□□□□ -1.42
Cdx1P18111 Gm11482-201ENSMUST00000147067 719 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx1P18111 Pitpnm2os2-202ENSMUST00000162577 744 ntTSL 3 BASIC6.15□□□□□ -1.42
Cdx1P18111 Trp53-ps-201ENSMUST00000166597 141 ntBASIC6.15□□□□□ -1.42
Cdx1P18111 Slc15a2-212ENSMUST00000168279 958 ntTSL 3 BASIC6.15□□□□□ -1.42
Cdx1P18111 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx1P18111 Gm7031-201ENSMUST00000173709 919 ntBASIC6.15□□□□□ -1.42
Cdx1P18111 Gm26738-201ENSMUST00000181312 601 ntBASIC6.15□□□□□ -1.42
Cdx1P18111 Gm18821-201ENSMUST00000184135 709 ntBASIC6.15□□□□□ -1.42
Cdx1P18111 Gm28126-201ENSMUST00000185286 356 ntTSL 5 BASIC6.15□□□□□ -1.42
Cdx1P18111 Gm28421-201ENSMUST00000186378 356 ntTSL 5 BASIC6.15□□□□□ -1.42
Cdx1P18111 Gm28212-201ENSMUST00000187114 356 ntTSL 5 BASIC6.15□□□□□ -1.42
Cdx1P18111 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx1P18111 Gm28355-201ENSMUST00000187443 356 ntTSL 5 BASIC6.15□□□□□ -1.42
Cdx1P18111 Gm29568-201ENSMUST00000187884 356 ntTSL 5 BASIC6.15□□□□□ -1.42
Cdx1P18111 Gm29080-201ENSMUST00000188565 356 ntTSL 5 BASIC6.15□□□□□ -1.42
Cdx1P18111 Gm28944-201ENSMUST00000188946 356 ntTSL 5 BASIC6.15□□□□□ -1.42
Cdx1P18111 Gm28908-201ENSMUST00000189002 356 ntTSL 5 BASIC6.15□□□□□ -1.42
Cdx1P18111 Gm3142-201ENSMUST00000190107 414 ntBASIC6.15□□□□□ -1.42
Cdx1P18111 Gm29078-201ENSMUST00000190611 356 ntTSL 5 BASIC6.15□□□□□ -1.42
Cdx1P18111 Gm34217-201ENSMUST00000193562 356 ntTSL 5 BASIC6.15□□□□□ -1.42
Cdx1P18111 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC6.15□□□□□ -1.42
Cdx1P18111 Gm43247-201ENSMUST00000198638 481 ntBASIC6.15□□□□□ -1.42
Cdx1P18111 Gm42529-201ENSMUST00000201843 741 ntTSL 3 BASIC6.15□□□□□ -1.42
Cdx1P18111 Sycp3-201ENSMUST00000020252 1139 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx1P18111 Gm8686-201ENSMUST00000203028 388 ntBASIC6.15□□□□□ -1.42
Cdx1P18111 Tmem147-206ENSMUST00000208169 537 ntTSL 5 BASIC6.15□□□□□ -1.42
Cdx1P18111 Gm2788-205ENSMUST00000209849 933 ntTSL 5 BASIC6.15□□□□□ -1.42
Cdx1P18111 Gm40421-201ENSMUST00000218991 658 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx1P18111 4930555G21Rik-201ENSMUST00000221718 537 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx1P18111 AC158983.1-201ENSMUST00000225691 221 ntBASIC6.15□□□□□ -1.42
Cdx1P18111 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx1P18111 Cox8c-201ENSMUST00000053611 458 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx1P18111 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
Cdx1P18111 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Cdx1P18111 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Cdx1P18111 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
Cdx1P18111 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Cdx1P18111 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC6.15□□□□□ -1.43
Cdx1P18111 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Cdx1P18111 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Cdx1P18111 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Cdx1P18111 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Cdx1P18111 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Cdx1P18111 Nmnat1-202ENSMUST00000105693 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Cdx1P18111 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Cdx1P18111 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Cdx1P18111 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.43
Cdx1P18111 Gm26561-201ENSMUST00000180743 1413 ntTSL 5 BASIC6.15□□□□□ -1.43
Cdx1P18111 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Cdx1P18111 Spp1-205ENSMUST00000112748 1456 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
Cdx1P18111 R3hdm1-208ENSMUST00000187900 3982 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Cdx1P18111 Selenop-201ENSMUST00000082424 2013 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Cdx1P18111 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms