Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Col1a1P11087 AC164433.1-201ENSMUST00000226138 1544 ntBASIC8.77□□□□□ -1
Col1a1P11087 Svep1-201ENSMUST00000042850 11629 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Col1a1P11087 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1
Col1a1P11087 Prokr1-203ENSMUST00000204682 4230 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col1a1P11087 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Col1a1P11087 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Col1a1P11087 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Col1a1P11087 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Col1a1P11087 Celf5-204ENSMUST00000120856 3861 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Col1a1P11087 Gm28469-201ENSMUST00000186374 2166 ntTSL 5 BASIC8.77□□□□□ -1.01
Col1a1P11087 Gm28134-201ENSMUST00000188690 2166 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Col1a1P11087 Gm28593-201ENSMUST00000190989 2170 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Col1a1P11087 Gm37075-201ENSMUST00000191888 2166 ntTSL 5 BASIC8.77□□□□□ -1.01
Col1a1P11087 Gm37574-201ENSMUST00000194264 2166 ntTSL 5 BASIC8.77□□□□□ -1.01
Col1a1P11087 Cenpo-205ENSMUST00000140975 4348 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col1a1P11087 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Col1a1P11087 Tmem175-202ENSMUST00000078323 2374 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col1a1P11087 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Col1a1P11087 Gm4767-202ENSMUST00000188096 4725 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col1a1P11087 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Col1a1P11087 Gm38099-201ENSMUST00000193280 3170 ntBASIC8.77□□□□□ -1.01
Col1a1P11087 Ccnyl1-201ENSMUST00000094898 2923 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Col1a1P11087 Clasp1-220ENSMUST00000191445 4914 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Col1a1P11087 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col1a1P11087 Mtrf1-201ENSMUST00000022600 1799 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col1a1P11087 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col1a1P11087 Dcdc2a-202ENSMUST00000069614 6634 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col1a1P11087 Gm31152-201ENSMUST00000210319 2171 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Col1a1P11087 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Col1a1P11087 AC168056.4-201ENSMUST00000223835 2567 ntBASIC8.77□□□□□ -1.01
Col1a1P11087 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Col1a1P11087 Gm42969-201ENSMUST00000199858 3631 ntBASIC8.77□□□□□ -1.01
Col1a1P11087 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Col1a1P11087 Gm22781-201ENSMUST00000104083 137 ntBASIC8.77□□□□□ -1.01
Col1a1P11087 Gm15081-201ENSMUST00000119794 844 ntBASIC8.77□□□□□ -1.01
Col1a1P11087 Gm14787-201ENSMUST00000121236 388 ntBASIC8.77□□□□□ -1.01
Col1a1P11087 Gm8722-201ENSMUST00000121466 769 ntBASIC8.77□□□□□ -1.01
Col1a1P11087 Gm7289-201ENSMUST00000168993 734 ntBASIC8.77□□□□□ -1.01
Col1a1P11087 Gm20530-201ENSMUST00000174261 254 ntBASIC8.77□□□□□ -1.01
Col1a1P11087 Gm8357-201ENSMUST00000181115 1011 ntBASIC8.77□□□□□ -1.01
Col1a1P11087 Gm43048-201ENSMUST00000196101 388 ntBASIC8.77□□□□□ -1.01
Col1a1P11087 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC8.77□□□□□ -1.01
Col1a1P11087 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC8.77□□□□□ -1.01
Col1a1P11087 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col1a1P11087 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Col1a1P11087 Olfr572-202ENSMUST00000214096 1126 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Col1a1P11087 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC8.77□□□□□ -1.01
Col1a1P11087 AC159267.1-201ENSMUST00000226702 678 ntBASIC8.77□□□□□ -1.01
Col1a1P11087 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col1a1P11087 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Col1a1P11087 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Col1a1P11087 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col1a1P11087 Gm12661-201ENSMUST00000118780 3335 ntBASIC8.76□□□□□ -1.01
Col1a1P11087 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Col1a1P11087 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col1a1P11087 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col1a1P11087 Smc2-201ENSMUST00000102915 5404 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col1a1P11087 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col1a1P11087 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col1a1P11087 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col1a1P11087 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
Col1a1P11087 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col1a1P11087 Sox6-206ENSMUST00000205405 2903 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Col1a1P11087 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col1a1P11087 Gm43196-201ENSMUST00000201762 2114 ntBASIC8.76□□□□□ -1.01
Col1a1P11087 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Col1a1P11087 4930551I15Rik-201ENSMUST00000219700 2143 ntTSL 5 BASIC8.76□□□□□ -1.01
Col1a1P11087 Gpm6b-203ENSMUST00000112224 4644 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col1a1P11087 Prdm16-204ENSMUST00000105636 8426 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col1a1P11087 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC8.76□□□□□ -1.01
Col1a1P11087 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col1a1P11087 Ank3-203ENSMUST00000092431 5823 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Col1a1P11087 Adgrl2-213ENSMUST00000199059 4637 ntTSL 5 BASIC8.76□□□□□ -1.01
Col1a1P11087 Meis1-209ENSMUST00000185131 3346 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col1a1P11087 Gm43430-201ENSMUST00000196513 3897 ntBASIC8.76□□□□□ -1.01
Col1a1P11087 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col1a1P11087 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Col1a1P11087 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col1a1P11087 Prdm14-201ENSMUST00000047577 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col1a1P11087 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Col1a1P11087 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col1a1P11087 Gm5611-201ENSMUST00000164523 852 ntBASIC8.76□□□□□ -1.01
Col1a1P11087 Gm4202-201ENSMUST00000169025 733 ntBASIC8.76□□□□□ -1.01
Col1a1P11087 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Col1a1P11087 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC8.76□□□□□ -1.01
Col1a1P11087 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC8.76□□□□□ -1.01
Col1a1P11087 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC8.76□□□□□ -1.01
Col1a1P11087 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col1a1P11087 Gm44374-201ENSMUST00000199821 140 ntBASIC8.76□□□□□ -1.01
Col1a1P11087 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Col1a1P11087 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col1a1P11087 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Col1a1P11087 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col1a1P11087 Ank3-231ENSMUST00000182884 9963 ntAPPRIS P4 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col1a1P11087 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC8.76□□□□□ -1.01
Col1a1P11087 Gpr50-201ENSMUST00000070449 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col1a1P11087 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC8.76□□□□□ -1.01
Col1a1P11087 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col1a1P11087 AC153940.1-201ENSMUST00000220149 5300 ntBASIC8.75□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 117.3 ms