Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CopeO89079 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CopeO89079 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC7.64□□□□□ -1.19
CopeO89079 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
CopeO89079 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC7.64□□□□□ -1.19
CopeO89079 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC7.64□□□□□ -1.19
CopeO89079 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC7.63□□□□□ -1.19
CopeO89079 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
CopeO89079 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CopeO89079 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CopeO89079 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CopeO89079 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC7.63□□□□□ -1.19
CopeO89079 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CopeO89079 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC7.63□□□□□ -1.19
CopeO89079 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC7.63□□□□□ -1.19
CopeO89079 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CopeO89079 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CopeO89079 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC7.63□□□□□ -1.19
CopeO89079 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CopeO89079 Gm40778-201ENSMUST00000217825 1344 ntBASIC7.63□□□□□ -1.19
CopeO89079 Gm22900-201ENSMUST00000104538 130 ntBASIC7.63□□□□□ -1.19
CopeO89079 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
CopeO89079 Gm25320-201ENSMUST00000122551 324 ntBASIC7.63□□□□□ -1.19
CopeO89079 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC7.63□□□□□ -1.19
CopeO89079 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC7.63□□□□□ -1.19
CopeO89079 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC7.63□□□□□ -1.19
CopeO89079 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CopeO89079 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CopeO89079 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CopeO89079 Gm5251-201ENSMUST00000188959 472 ntBASIC7.63□□□□□ -1.19
CopeO89079 AL645704.1-201ENSMUST00000221642 604 ntBASIC7.63□□□□□ -1.19
CopeO89079 Gm18629-201ENSMUST00000222496 884 ntBASIC7.63□□□□□ -1.19
CopeO89079 AC163651.1-201ENSMUST00000222500 372 ntBASIC7.63□□□□□ -1.19
CopeO89079 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CopeO89079 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CopeO89079 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CopeO89079 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC7.63□□□□□ -1.19
CopeO89079 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CopeO89079 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
CopeO89079 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
CopeO89079 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC7.63□□□□□ -1.19
CopeO89079 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CopeO89079 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CopeO89079 Gm37161-201ENSMUST00000191994 2697 ntBASIC7.63□□□□□ -1.19
CopeO89079 Gm44141-201ENSMUST00000204231 1583 ntBASIC7.63□□□□□ -1.19
CopeO89079 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CopeO89079 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CopeO89079 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC7.62□□□□□ -1.19
CopeO89079 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
CopeO89079 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
CopeO89079 Casp8-202ENSMUST00000165549 1917 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
CopeO89079 Gm44185-201ENSMUST00000204539 3307 ntBASIC7.62□□□□□ -1.19
CopeO89079 Gm42969-201ENSMUST00000199858 3631 ntBASIC7.62□□□□□ -1.19
CopeO89079 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
CopeO89079 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC7.62□□□□□ -1.19
CopeO89079 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CopeO89079 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
CopeO89079 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
CopeO89079 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
CopeO89079 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
CopeO89079 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CopeO89079 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CopeO89079 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC7.62□□□□□ -1.19
CopeO89079 Gm14487-201ENSMUST00000145413 1259 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CopeO89079 Gm26070-201ENSMUST00000157500 137 ntBASIC7.62□□□□□ -1.19
CopeO89079 Gm24011-201ENSMUST00000157732 268 ntBASIC7.62□□□□□ -1.19
CopeO89079 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC7.62□□□□□ -1.19
CopeO89079 Traj54-201ENSMUST00000165071 54 ntBASIC7.62□□□□□ -1.19
CopeO89079 Gm6838-201ENSMUST00000172851 582 ntBASIC7.62□□□□□ -1.19
CopeO89079 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CopeO89079 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC7.62□□□□□ -1.19
CopeO89079 Gm8870-201ENSMUST00000188170 775 ntBASIC7.62□□□□□ -1.19
CopeO89079 D7Ertd128e-201ENSMUST00000189744 928 ntTSL 2 BASIC7.62□□□□□ -1.19
CopeO89079 Gm29471-201ENSMUST00000190527 700 ntBASIC7.62□□□□□ -1.19
CopeO89079 Gm29739-201ENSMUST00000191760 529 ntBASIC7.62□□□□□ -1.19
CopeO89079 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC7.62□□□□□ -1.19
CopeO89079 Gm38218-201ENSMUST00000193555 4689 ntBASIC7.62□□□□□ -1.19
CopeO89079 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC7.62□□□□□ -1.19
CopeO89079 Ighv10-2-201ENSMUST00000195182 298 ntBASIC7.62□□□□□ -1.19
CopeO89079 Gm43815-201ENSMUST00000197676 990 ntBASIC7.62□□□□□ -1.19
CopeO89079 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
CopeO89079 Gm44306-201ENSMUST00000203058 203 ntBASIC7.62□□□□□ -1.19
CopeO89079 Gm9689-201ENSMUST00000210009 428 ntBASIC7.62□□□□□ -1.19
CopeO89079 Nxpe1-ps-202ENSMUST00000210160 956 ntTSL 5 BASIC7.62□□□□□ -1.19
CopeO89079 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC7.62□□□□□ -1.19
CopeO89079 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC7.62□□□□□ -1.19
CopeO89079 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CopeO89079 CT030170.6-202ENSMUST00000223186 544 ntBASIC7.62□□□□□ -1.19
CopeO89079 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
CopeO89079 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC7.62□□□□□ -1.19
CopeO89079 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC7.62□□□□□ -1.19
CopeO89079 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC7.62□□□□□ -1.19
CopeO89079 Dnajb5-202ENSMUST00000084662 3302 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
CopeO89079 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CopeO89079 Gm37080-201ENSMUST00000194804 2404 ntBASIC7.62□□□□□ -1.19
CopeO89079 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CopeO89079 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
CopeO89079 Gm43606-201ENSMUST00000195938 3556 ntBASIC7.62□□□□□ -1.19
CopeO89079 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
CopeO89079 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms