Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm45279-201ENSMUST00000210315 391 ntBASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Lrrc29-204ENSMUST00000210801 3830 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 AC155709.1-201ENSMUST00000218794 162 ntBASIC7.67□□□□□ -1.18
Col4a6B1AVK5 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Pcdh15-228ENSMUST00000152819 2867 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 AC164433.1-201ENSMUST00000226138 1544 ntBASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Epb42-202ENSMUST00000102490 4115 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm44117-201ENSMUST00000204442 1758 ntBASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gria1-202ENSMUST00000094179 5399 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Adgrl3-218ENSMUST00000122037 4649 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 C330007P06Rik-202ENSMUST00000115248 3340 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Dgkh-204ENSMUST00000227767 3319 ntBASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm44001-201ENSMUST00000203158 3773 ntBASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Epn2-212ENSMUST00000178202 4317 ntAPPRIS P3 TSL 5 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Mtor-202ENSMUST00000103221 8564 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm22774-201ENSMUST00000102084 109 ntBASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm2178-201ENSMUST00000104927 357 ntBASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm12939-201ENSMUST00000117303 165 ntBASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm5390-201ENSMUST00000119069 1230 ntBASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm6921-201ENSMUST00000161478 435 ntBASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm3760-201ENSMUST00000167475 804 ntBASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm4202-201ENSMUST00000169025 733 ntBASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm29141-201ENSMUST00000190357 882 ntBASIC7.66□□□□□ -1.18
Col4a6B1AVK5 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm7019-201ENSMUST00000194122 369 ntBASIC7.66□□□□□ -1.18
Col4a6B1AVK5 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm2860-201ENSMUST00000199226 707 ntBASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 AC124778.1-201ENSMUST00000216013 162 ntBASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Cyp4v3-201ENSMUST00000095328 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 2600014E21Rik-201ENSMUST00000186411 4805 ntTSL 5 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm37200-201ENSMUST00000193689 2172 ntBASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Tmem108-201ENSMUST00000049452 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Gm9585-201ENSMUST00000219681 1404 ntBASIC7.66□□□□□ -1.18
Col4a6B1AVK5 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Col4a6B1AVK5 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC7.65□□□□□ -1.18
Col4a6B1AVK5 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col4a6B1AVK5 Uba7-201ENSMUST00000035216 3195 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col4a6B1AVK5 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col4a6B1AVK5 Sestd1-201ENSMUST00000102659 2720 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col4a6B1AVK5 Gm44437-201ENSMUST00000203832 4038 ntBASIC7.65□□□□□ -1.18
Col4a6B1AVK5 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col4a6B1AVK5 D6Wsu163e-201ENSMUST00000032497 2501 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col4a6B1AVK5 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col4a6B1AVK5 Sptan1-208ENSMUST00000129241 7585 ntTSL 5 BASIC7.65□□□□□ -1.18
Col4a6B1AVK5 Ccdc114-203ENSMUST00000210602 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col4a6B1AVK5 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col4a6B1AVK5 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Col4a6B1AVK5 Gm38056-201ENSMUST00000193928 5027 ntBASIC7.65□□□□□ -1.18
Col4a6B1AVK5 Gm14891-201ENSMUST00000117378 596 ntBASIC7.65□□□□□ -1.18
Col4a6B1AVK5 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Col4a6B1AVK5 Gm7452-201ENSMUST00000200764 788 ntBASIC7.65□□□□□ -1.18
Col4a6B1AVK5 Gm43377-201ENSMUST00000201640 455 ntBASIC7.65□□□□□ -1.18
Col4a6B1AVK5 Gm18690-201ENSMUST00000204488 985 ntBASIC7.65□□□□□ -1.18
Col4a6B1AVK5 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC7.65□□□□□ -1.18
Col4a6B1AVK5 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col4a6B1AVK5 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col4a6B1AVK5 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Col4a6B1AVK5 Ttc30a1-201ENSMUST00000099994 3721 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Col4a6B1AVK5 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Col4a6B1AVK5 Rpgr-206ENSMUST00000115534 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col4a6B1AVK5 Gm37465-201ENSMUST00000192845 3290 ntBASIC7.65□□□□□ -1.19
Col4a6B1AVK5 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Col4a6B1AVK5 Gm45407-201ENSMUST00000209499 3676 ntBASIC7.65□□□□□ -1.19
Col4a6B1AVK5 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Col4a6B1AVK5 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC7.65□□□□□ -1.19
Col4a6B1AVK5 Ralgps1-204ENSMUST00000113165 6192 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
Col4a6B1AVK5 Fbxw10-201ENSMUST00000036085 3354 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms