Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Crlf3Q9Z2L7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Crlf3Q9Z2L7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Crlf3Q9Z2L7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Crlf3Q9Z2L7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Crlf3Q9Z2L7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Crlf3Q9Z2L7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Crlf3Q9Z2L7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.69■□□□□ 0.58
Crlf3Q9Z2L7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Crlf3Q9Z2L7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Crlf3Q9Z2L7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Crlf3Q9Z2L7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.69■□□□□ 0.58
Crlf3Q9Z2L7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.69■□□□□ 0.58
Crlf3Q9Z2L7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Crlf3Q9Z2L7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
Crlf3Q9Z2L7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Crlf3Q9Z2L7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Crlf3Q9Z2L7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Crlf3Q9Z2L7 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Crlf3Q9Z2L7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Crlf3Q9Z2L7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Crlf3Q9Z2L7 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Crlf3Q9Z2L7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Crlf3Q9Z2L7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Crlf3Q9Z2L7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Crlf3Q9Z2L7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Crlf3Q9Z2L7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Crlf3Q9Z2L7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Crlf3Q9Z2L7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Crlf3Q9Z2L7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Crlf3Q9Z2L7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Crlf3Q9Z2L7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Crlf3Q9Z2L7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Crlf3Q9Z2L7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Crlf3Q9Z2L7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Crlf3Q9Z2L7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Crlf3Q9Z2L7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Crlf3Q9Z2L7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Crlf3Q9Z2L7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Crlf3Q9Z2L7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Crlf3Q9Z2L7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Crlf3Q9Z2L7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Crlf3Q9Z2L7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Crlf3Q9Z2L7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Crlf3Q9Z2L7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Crlf3Q9Z2L7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Crlf3Q9Z2L7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Crlf3Q9Z2L7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Crlf3Q9Z2L7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Crlf3Q9Z2L7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Crlf3Q9Z2L7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Crlf3Q9Z2L7 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.67■□□□□ 0.58
Crlf3Q9Z2L7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Crlf3Q9Z2L7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Crlf3Q9Z2L7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Crlf3Q9Z2L7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Crlf3Q9Z2L7 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.67■□□□□ 0.58
Crlf3Q9Z2L7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Crlf3Q9Z2L7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Crlf3Q9Z2L7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Crlf3Q9Z2L7 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Crlf3Q9Z2L7 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Crlf3Q9Z2L7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Crlf3Q9Z2L7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Crlf3Q9Z2L7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.66■□□□□ 0.58
Crlf3Q9Z2L7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.66■□□□□ 0.58
Crlf3Q9Z2L7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Crlf3Q9Z2L7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.66■□□□□ 0.58
Crlf3Q9Z2L7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Crlf3Q9Z2L7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Crlf3Q9Z2L7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Crlf3Q9Z2L7 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.65■□□□□ 0.58
Crlf3Q9Z2L7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Crlf3Q9Z2L7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Crlf3Q9Z2L7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Crlf3Q9Z2L7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Crlf3Q9Z2L7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Crlf3Q9Z2L7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.65■□□□□ 0.58
Crlf3Q9Z2L7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Crlf3Q9Z2L7 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Crlf3Q9Z2L7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Crlf3Q9Z2L7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.65■□□□□ 0.58
Crlf3Q9Z2L7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Crlf3Q9Z2L7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Crlf3Q9Z2L7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Crlf3Q9Z2L7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Crlf3Q9Z2L7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Crlf3Q9Z2L7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Crlf3Q9Z2L7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.64■□□□□ 0.57
Crlf3Q9Z2L7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Crlf3Q9Z2L7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Crlf3Q9Z2L7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Crlf3Q9Z2L7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Crlf3Q9Z2L7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Crlf3Q9Z2L7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Crlf3Q9Z2L7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.63■□□□□ 0.57
Crlf3Q9Z2L7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Crlf3Q9Z2L7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.63■□□□□ 0.57
Crlf3Q9Z2L7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Crlf3Q9Z2L7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms