Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.84■□□□□ 0.45
Cldn9Q9Z0S7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn9Q9Z0S7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn9Q9Z0S7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn9Q9Z0S7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn9Q9Z0S7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn9Q9Z0S7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Cldn9Q9Z0S7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Cldn9Q9Z0S7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Cldn9Q9Z0S7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cldn9Q9Z0S7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cldn9Q9Z0S7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.83■□□□□ 0.45
Cldn9Q9Z0S7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cldn9Q9Z0S7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cldn9Q9Z0S7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cldn9Q9Z0S7 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cldn9Q9Z0S7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cldn9Q9Z0S7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.83■□□□□ 0.45
Cldn9Q9Z0S7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn9Q9Z0S7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn9Q9Z0S7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn9Q9Z0S7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn9Q9Z0S7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn9Q9Z0S7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn9Q9Z0S7 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.82■□□□□ 0.44
Cldn9Q9Z0S7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn9Q9Z0S7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cldn9Q9Z0S7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Cldn9Q9Z0S7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.82■□□□□ 0.44
Cldn9Q9Z0S7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn9Q9Z0S7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.82■□□□□ 0.44
Cldn9Q9Z0S7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn9Q9Z0S7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn9Q9Z0S7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn9Q9Z0S7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn9Q9Z0S7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn9Q9Z0S7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn9Q9Z0S7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn9Q9Z0S7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn9Q9Z0S7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn9Q9Z0S7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn9Q9Z0S7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn9Q9Z0S7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn9Q9Z0S7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cldn9Q9Z0S7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn9Q9Z0S7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn9Q9Z0S7 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.81■□□□□ 0.44
Cldn9Q9Z0S7 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.81■□□□□ 0.44
Cldn9Q9Z0S7 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.81■□□□□ 0.44
Cldn9Q9Z0S7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn9Q9Z0S7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn9Q9Z0S7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn9Q9Z0S7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cldn9Q9Z0S7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.81■□□□□ 0.44
Cldn9Q9Z0S7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn9Q9Z0S7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn9Q9Z0S7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn9Q9Z0S7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn9Q9Z0S7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn9Q9Z0S7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.8■□□□□ 0.44
Cldn9Q9Z0S7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn9Q9Z0S7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn9Q9Z0S7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn9Q9Z0S7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn9Q9Z0S7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cldn9Q9Z0S7 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.8■□□□□ 0.44
Cldn9Q9Z0S7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Cldn9Q9Z0S7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn9Q9Z0S7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn9Q9Z0S7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn9Q9Z0S7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn9Q9Z0S7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cldn9Q9Z0S7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.79■□□□□ 0.44
Cldn9Q9Z0S7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn9Q9Z0S7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cldn9Q9Z0S7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.79■□□□□ 0.44
Cldn9Q9Z0S7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn9Q9Z0S7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
Cldn9Q9Z0S7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn9Q9Z0S7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn9Q9Z0S7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn9Q9Z0S7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn9Q9Z0S7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn9Q9Z0S7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn9Q9Z0S7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn9Q9Z0S7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.78■□□□□ 0.44
Cldn9Q9Z0S7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn9Q9Z0S7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Cldn9Q9Z0S7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn9Q9Z0S7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn9Q9Z0S7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn9Q9Z0S7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn9Q9Z0S7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn9Q9Z0S7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn9Q9Z0S7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn9Q9Z0S7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Cldn9Q9Z0S7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn9Q9Z0S7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Cldn9Q9Z0S7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Cldn9Q9Z0S7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms