Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Cldn3Q9Z0G9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn3Q9Z0G9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn3Q9Z0G9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn3Q9Z0G9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn3Q9Z0G9 Nespas-201ENSMUST00000143738 1083 ntBASIC18.73■□□□□ 0.59
Cldn3Q9Z0G9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.73■□□□□ 0.59
Cldn3Q9Z0G9 Gm27405-201ENSMUST00000184201 112 ntBASIC18.73■□□□□ 0.59
Cldn3Q9Z0G9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn3Q9Z0G9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn3Q9Z0G9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn3Q9Z0G9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn3Q9Z0G9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.73■□□□□ 0.59
Cldn3Q9Z0G9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn3Q9Z0G9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Cldn3Q9Z0G9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn3Q9Z0G9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Cldn3Q9Z0G9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn3Q9Z0G9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn3Q9Z0G9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cldn3Q9Z0G9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.72■□□□□ 0.59
Cldn3Q9Z0G9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn3Q9Z0G9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn3Q9Z0G9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn3Q9Z0G9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn3Q9Z0G9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn3Q9Z0G9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn3Q9Z0G9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn3Q9Z0G9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn3Q9Z0G9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn3Q9Z0G9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn3Q9Z0G9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn3Q9Z0G9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn3Q9Z0G9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn3Q9Z0G9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn3Q9Z0G9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn3Q9Z0G9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.71■□□□□ 0.59
Cldn3Q9Z0G9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn3Q9Z0G9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn3Q9Z0G9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn3Q9Z0G9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.71■□□□□ 0.59
Cldn3Q9Z0G9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.71■□□□□ 0.59
Cldn3Q9Z0G9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn3Q9Z0G9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn3Q9Z0G9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn3Q9Z0G9 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.71■□□□□ 0.59
Cldn3Q9Z0G9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
Cldn3Q9Z0G9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn3Q9Z0G9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn3Q9Z0G9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn3Q9Z0G9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Cldn3Q9Z0G9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.7■□□□□ 0.58
Cldn3Q9Z0G9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn3Q9Z0G9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn3Q9Z0G9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cldn3Q9Z0G9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.7■□□□□ 0.58
Cldn3Q9Z0G9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn3Q9Z0G9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn3Q9Z0G9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Cldn3Q9Z0G9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn3Q9Z0G9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cldn3Q9Z0G9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cldn3Q9Z0G9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Cldn3Q9Z0G9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn3Q9Z0G9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn3Q9Z0G9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.7■□□□□ 0.58
Cldn3Q9Z0G9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn3Q9Z0G9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn3Q9Z0G9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cldn3Q9Z0G9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cldn3Q9Z0G9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cldn3Q9Z0G9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.69■□□□□ 0.58
Cldn3Q9Z0G9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn3Q9Z0G9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn3Q9Z0G9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn3Q9Z0G9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn3Q9Z0G9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn3Q9Z0G9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn3Q9Z0G9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn3Q9Z0G9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.69■□□□□ 0.58
Cldn3Q9Z0G9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cldn3Q9Z0G9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Cldn3Q9Z0G9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn3Q9Z0G9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.68■□□□□ 0.58
Cldn3Q9Z0G9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn3Q9Z0G9 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.68■□□□□ 0.58
Cldn3Q9Z0G9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn3Q9Z0G9 Gm7291-201ENSMUST00000199147 382 ntBASIC18.68■□□□□ 0.58
Cldn3Q9Z0G9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Cldn3Q9Z0G9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.68■□□□□ 0.58
Cldn3Q9Z0G9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn3Q9Z0G9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn3Q9Z0G9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn3Q9Z0G9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn3Q9Z0G9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cldn3Q9Z0G9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn3Q9Z0G9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn3Q9Z0G9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn3Q9Z0G9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn3Q9Z0G9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms