Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx9Q9WUH2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx9Q9WUH2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx9Q9WUH2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.68■□□□□ 0.42
Lhx9Q9WUH2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx9Q9WUH2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx9Q9WUH2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Lhx9Q9WUH2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Lhx9Q9WUH2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.68■□□□□ 0.42
Lhx9Q9WUH2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx9Q9WUH2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Lhx9Q9WUH2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.68■□□□□ 0.42
Lhx9Q9WUH2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Lhx9Q9WUH2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx9Q9WUH2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.68■□□□□ 0.42
Lhx9Q9WUH2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Lhx9Q9WUH2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx9Q9WUH2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx9Q9WUH2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx9Q9WUH2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx9Q9WUH2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx9Q9WUH2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx9Q9WUH2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx9Q9WUH2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx9Q9WUH2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx9Q9WUH2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx9Q9WUH2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx9Q9WUH2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.67■□□□□ 0.42
Lhx9Q9WUH2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx9Q9WUH2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx9Q9WUH2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.67■□□□□ 0.42
Lhx9Q9WUH2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx9Q9WUH2 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.67■□□□□ 0.42
Lhx9Q9WUH2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx9Q9WUH2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx9Q9WUH2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx9Q9WUH2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx9Q9WUH2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx9Q9WUH2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx9Q9WUH2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.66■□□□□ 0.42
Lhx9Q9WUH2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx9Q9WUH2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.66■□□□□ 0.42
Lhx9Q9WUH2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx9Q9WUH2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx9Q9WUH2 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.66■□□□□ 0.42
Lhx9Q9WUH2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx9Q9WUH2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx9Q9WUH2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx9Q9WUH2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx9Q9WUH2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Lhx9Q9WUH2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx9Q9WUH2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.65■□□□□ 0.42
Lhx9Q9WUH2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx9Q9WUH2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx9Q9WUH2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.65■□□□□ 0.42
Lhx9Q9WUH2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.65■□□□□ 0.42
Lhx9Q9WUH2 Gm26524-201ENSMUST00000192339 390 ntBASIC17.65■□□□□ 0.42
Lhx9Q9WUH2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.65■□□□□ 0.42
Lhx9Q9WUH2 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.65■□□□□ 0.42
Lhx9Q9WUH2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx9Q9WUH2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx9Q9WUH2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx9Q9WUH2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx9Q9WUH2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx9Q9WUH2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx9Q9WUH2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx9Q9WUH2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx9Q9WUH2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx9Q9WUH2 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.64■□□□□ 0.41
Lhx9Q9WUH2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx9Q9WUH2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.64■□□□□ 0.41
Lhx9Q9WUH2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx9Q9WUH2 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.64■□□□□ 0.41
Lhx9Q9WUH2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx9Q9WUH2 Rab3c-203ENSMUST00000224180 967 ntBASIC17.64■□□□□ 0.41
Lhx9Q9WUH2 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.64■□□□□ 0.41
Lhx9Q9WUH2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx9Q9WUH2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Lhx9Q9WUH2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx9Q9WUH2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx9Q9WUH2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx9Q9WUH2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx9Q9WUH2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx9Q9WUH2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.64■□□□□ 0.41
Lhx9Q9WUH2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx9Q9WUH2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx9Q9WUH2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Lhx9Q9WUH2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.63■□□□□ 0.41
Lhx9Q9WUH2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx9Q9WUH2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.63■□□□□ 0.41
Lhx9Q9WUH2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.63■□□□□ 0.41
Lhx9Q9WUH2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx9Q9WUH2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx9Q9WUH2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx9Q9WUH2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx9Q9WUH2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Lhx9Q9WUH2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx9Q9WUH2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx9Q9WUH2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx9Q9WUH2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms