Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clcn2Q9R0A1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clcn2Q9R0A1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clcn2Q9R0A1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Clcn2Q9R0A1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Clcn2Q9R0A1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Clcn2Q9R0A1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Clcn2Q9R0A1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clcn2Q9R0A1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clcn2Q9R0A1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clcn2Q9R0A1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Clcn2Q9R0A1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clcn2Q9R0A1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clcn2Q9R0A1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn2Q9R0A1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn2Q9R0A1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn2Q9R0A1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.9■□□□□ 0.62
Clcn2Q9R0A1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Clcn2Q9R0A1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn2Q9R0A1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Clcn2Q9R0A1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn2Q9R0A1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn2Q9R0A1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Clcn2Q9R0A1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.9■□□□□ 0.62
Clcn2Q9R0A1 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.9■□□□□ 0.62
Clcn2Q9R0A1 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.9■□□□□ 0.62
Clcn2Q9R0A1 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.9■□□□□ 0.62
Clcn2Q9R0A1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.9■□□□□ 0.62
Clcn2Q9R0A1 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.9■□□□□ 0.62
Clcn2Q9R0A1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn2Q9R0A1 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.9■□□□□ 0.62
Clcn2Q9R0A1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.9■□□□□ 0.62
Clcn2Q9R0A1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn2Q9R0A1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn2Q9R0A1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn2Q9R0A1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Clcn2Q9R0A1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Clcn2Q9R0A1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn2Q9R0A1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn2Q9R0A1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn2Q9R0A1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Clcn2Q9R0A1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Clcn2Q9R0A1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn2Q9R0A1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn2Q9R0A1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.89■□□□□ 0.61
Clcn2Q9R0A1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn2Q9R0A1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn2Q9R0A1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn2Q9R0A1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn2Q9R0A1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn2Q9R0A1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn2Q9R0A1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn2Q9R0A1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
Clcn2Q9R0A1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn2Q9R0A1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Clcn2Q9R0A1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn2Q9R0A1 Gm10849-201ENSMUST00000100397 618 ntBASIC18.88■□□□□ 0.61
Clcn2Q9R0A1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.88■□□□□ 0.61
Clcn2Q9R0A1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn2Q9R0A1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn2Q9R0A1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn2Q9R0A1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Clcn2Q9R0A1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn2Q9R0A1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn2Q9R0A1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn2Q9R0A1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn2Q9R0A1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn2Q9R0A1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn2Q9R0A1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.87■□□□□ 0.61
Clcn2Q9R0A1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.87■□□□□ 0.61
Clcn2Q9R0A1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn2Q9R0A1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn2Q9R0A1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn2Q9R0A1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn2Q9R0A1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Clcn2Q9R0A1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn2Q9R0A1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.86■□□□□ 0.61
Clcn2Q9R0A1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn2Q9R0A1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Clcn2Q9R0A1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn2Q9R0A1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn2Q9R0A1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn2Q9R0A1 Gm26571-201ENSMUST00000181399 666 ntBASIC18.86■□□□□ 0.61
Clcn2Q9R0A1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn2Q9R0A1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn2Q9R0A1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Clcn2Q9R0A1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Clcn2Q9R0A1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn2Q9R0A1 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn2Q9R0A1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.86■□□□□ 0.61
Clcn2Q9R0A1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn2Q9R0A1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Clcn2Q9R0A1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Clcn2Q9R0A1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Clcn2Q9R0A1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn2Q9R0A1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn2Q9R0A1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Clcn2Q9R0A1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn2Q9R0A1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn2Q9R0A1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms