Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a4Q9QZR9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.84■□□□□ 0.61
Col4a4Q9QZR9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a4Q9QZR9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a4Q9QZR9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Col4a4Q9QZR9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Col4a4Q9QZR9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col4a4Q9QZR9 Gm38285-201ENSMUST00000192928 922 ntBASIC18.83■□□□□ 0.61
Col4a4Q9QZR9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.83■□□□□ 0.61
Col4a4Q9QZR9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col4a4Q9QZR9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col4a4Q9QZR9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Col4a4Q9QZR9 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.83■□□□□ 0.6
Col4a4Q9QZR9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.83■□□□□ 0.6
Col4a4Q9QZR9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col4a4Q9QZR9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a4Q9QZR9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a4Q9QZR9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a4Q9QZR9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a4Q9QZR9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a4Q9QZR9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a4Q9QZR9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a4Q9QZR9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Col4a4Q9QZR9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.82■□□□□ 0.6
Col4a4Q9QZR9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.82■□□□□ 0.6
Col4a4Q9QZR9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a4Q9QZR9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a4Q9QZR9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.82■□□□□ 0.6
Col4a4Q9QZR9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.82■□□□□ 0.6
Col4a4Q9QZR9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a4Q9QZR9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Col4a4Q9QZR9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Col4a4Q9QZR9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.81■□□□□ 0.6
Col4a4Q9QZR9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a4Q9QZR9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a4Q9QZR9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a4Q9QZR9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a4Q9QZR9 Gm27463-201ENSMUST00000183569 57 ntBASIC18.81■□□□□ 0.6
Col4a4Q9QZR9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.81■□□□□ 0.6
Col4a4Q9QZR9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a4Q9QZR9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a4Q9QZR9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a4Q9QZR9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a4Q9QZR9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a4Q9QZR9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a4Q9QZR9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a4Q9QZR9 Gm12085-201ENSMUST00000119263 940 ntBASIC18.8■□□□□ 0.6
Col4a4Q9QZR9 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a4Q9QZR9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a4Q9QZR9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a4Q9QZR9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a4Q9QZR9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.8■□□□□ 0.6
Col4a4Q9QZR9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a4Q9QZR9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Col4a4Q9QZR9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a4Q9QZR9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Col4a4Q9QZR9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.79■□□□□ 0.6
Col4a4Q9QZR9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.79■□□□□ 0.6
Col4a4Q9QZR9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a4Q9QZR9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a4Q9QZR9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a4Q9QZR9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a4Q9QZR9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.79■□□□□ 0.6
Col4a4Q9QZR9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a4Q9QZR9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a4Q9QZR9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a4Q9QZR9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.78■□□□□ 0.6
Col4a4Q9QZR9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a4Q9QZR9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a4Q9QZR9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a4Q9QZR9 Gm28033-201ENSMUST00000184224 96 ntBASIC18.78■□□□□ 0.6
Col4a4Q9QZR9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Col4a4Q9QZR9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.78■□□□□ 0.6
Col4a4Q9QZR9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a4Q9QZR9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a4Q9QZR9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a4Q9QZR9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a4Q9QZR9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.78■□□□□ 0.6
Col4a4Q9QZR9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a4Q9QZR9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
Col4a4Q9QZR9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.77■□□□□ 0.6
Col4a4Q9QZR9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col4a4Q9QZR9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.77■□□□□ 0.6
Col4a4Q9QZR9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.77■□□□□ 0.6
Col4a4Q9QZR9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Col4a4Q9QZR9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.77■□□□□ 0.6
Col4a4Q9QZR9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col4a4Q9QZR9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col4a4Q9QZR9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col4a4Q9QZR9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col4a4Q9QZR9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Col4a4Q9QZR9 Mir5130-201ENSMUST00000175160 84 ntBASIC18.76■□□□□ 0.59
Col4a4Q9QZR9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col4a4Q9QZR9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Col4a4Q9QZR9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Col4a4Q9QZR9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col4a4Q9QZR9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.76■□□□□ 0.59
Col4a4Q9QZR9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.76■□□□□ 0.59
Col4a4Q9QZR9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.76■□□□□ 0.59
Col4a4Q9QZR9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms