Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.66■□□□□ 0.74
Rfx5Q9JL61 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx5Q9JL61 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx5Q9JL61 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx5Q9JL61 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx5Q9JL61 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.65■□□□□ 0.74
Rfx5Q9JL61 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.65■□□□□ 0.74
Rfx5Q9JL61 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.65■□□□□ 0.74
Rfx5Q9JL61 Gm4968-201ENSMUST00000071458 858 ntBASIC19.65■□□□□ 0.74
Rfx5Q9JL61 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx5Q9JL61 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx5Q9JL61 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.65■□□□□ 0.74
Rfx5Q9JL61 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx5Q9JL61 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx5Q9JL61 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx5Q9JL61 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx5Q9JL61 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Rfx5Q9JL61 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfx5Q9JL61 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.64■□□□□ 0.73
Rfx5Q9JL61 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfx5Q9JL61 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rfx5Q9JL61 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfx5Q9JL61 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfx5Q9JL61 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfx5Q9JL61 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfx5Q9JL61 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfx5Q9JL61 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfx5Q9JL61 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfx5Q9JL61 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx5Q9JL61 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.63■□□□□ 0.73
Rfx5Q9JL61 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Rfx5Q9JL61 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx5Q9JL61 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx5Q9JL61 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rfx5Q9JL61 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx5Q9JL61 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx5Q9JL61 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx5Q9JL61 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Rfx5Q9JL61 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx5Q9JL61 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.62■□□□□ 0.73
Rfx5Q9JL61 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.62■□□□□ 0.73
Rfx5Q9JL61 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.62■□□□□ 0.73
Rfx5Q9JL61 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Rfx5Q9JL61 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx5Q9JL61 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx5Q9JL61 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx5Q9JL61 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Rfx5Q9JL61 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx5Q9JL61 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx5Q9JL61 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx5Q9JL61 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx5Q9JL61 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx5Q9JL61 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx5Q9JL61 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx5Q9JL61 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx5Q9JL61 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.61■□□□□ 0.73
Rfx5Q9JL61 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx5Q9JL61 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.61■□□□□ 0.73
Rfx5Q9JL61 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx5Q9JL61 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx5Q9JL61 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Rfx5Q9JL61 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Rfx5Q9JL61 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx5Q9JL61 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx5Q9JL61 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rfx5Q9JL61 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rfx5Q9JL61 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rfx5Q9JL61 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rfx5Q9JL61 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.6■□□□□ 0.73
Rfx5Q9JL61 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rfx5Q9JL61 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.6■□□□□ 0.73
Rfx5Q9JL61 Gm5408-201ENSMUST00000197998 747 ntBASIC19.6■□□□□ 0.73
Rfx5Q9JL61 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.6■□□□□ 0.73
Rfx5Q9JL61 Rab3c-203ENSMUST00000224180 967 ntBASIC19.6■□□□□ 0.73
Rfx5Q9JL61 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Rfx5Q9JL61 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rfx5Q9JL61 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Rfx5Q9JL61 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rfx5Q9JL61 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rfx5Q9JL61 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx5Q9JL61 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx5Q9JL61 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx5Q9JL61 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx5Q9JL61 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx5Q9JL61 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.59■□□□□ 0.73
Rfx5Q9JL61 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.59■□□□□ 0.73
Rfx5Q9JL61 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx5Q9JL61 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx5Q9JL61 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx5Q9JL61 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.59■□□□□ 0.73
Rfx5Q9JL61 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx5Q9JL61 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx5Q9JL61 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.58■□□□□ 0.73
Rfx5Q9JL61 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rfx5Q9JL61 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rfx5Q9JL61 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.58■□□□□ 0.72
Rfx5Q9JL61 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rfx5Q9JL61 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfx5Q9JL61 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfx5Q9JL61 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms