Protein–RNA interactions for Protein: Q9ESJ4

Nckipsd, NCK-interacting protein with SH3 domain, mousemouse

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NckipsdQ9ESJ4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NckipsdQ9ESJ4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NckipsdQ9ESJ4 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NckipsdQ9ESJ4 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
NckipsdQ9ESJ4 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NckipsdQ9ESJ4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NckipsdQ9ESJ4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NckipsdQ9ESJ4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.3■□□□□ 0.68
NckipsdQ9ESJ4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NckipsdQ9ESJ4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NckipsdQ9ESJ4 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.3■□□□□ 0.68
NckipsdQ9ESJ4 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NckipsdQ9ESJ4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
NckipsdQ9ESJ4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NckipsdQ9ESJ4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NckipsdQ9ESJ4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NckipsdQ9ESJ4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NckipsdQ9ESJ4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
NckipsdQ9ESJ4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NckipsdQ9ESJ4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
NckipsdQ9ESJ4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NckipsdQ9ESJ4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NckipsdQ9ESJ4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NckipsdQ9ESJ4 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.29■□□□□ 0.68
NckipsdQ9ESJ4 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
NckipsdQ9ESJ4 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NckipsdQ9ESJ4 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NckipsdQ9ESJ4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NckipsdQ9ESJ4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NckipsdQ9ESJ4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NckipsdQ9ESJ4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NckipsdQ9ESJ4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NckipsdQ9ESJ4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NckipsdQ9ESJ4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
NckipsdQ9ESJ4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.28■□□□□ 0.68
NckipsdQ9ESJ4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NckipsdQ9ESJ4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NckipsdQ9ESJ4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NckipsdQ9ESJ4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
NckipsdQ9ESJ4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
NckipsdQ9ESJ4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NckipsdQ9ESJ4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NckipsdQ9ESJ4 Gm18666-201ENSMUST00000190039 958 ntBASIC19.27■□□□□ 0.68
NckipsdQ9ESJ4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.27■□□□□ 0.68
NckipsdQ9ESJ4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NckipsdQ9ESJ4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NckipsdQ9ESJ4 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NckipsdQ9ESJ4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NckipsdQ9ESJ4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NckipsdQ9ESJ4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NckipsdQ9ESJ4 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.27■□□□□ 0.67
NckipsdQ9ESJ4 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NckipsdQ9ESJ4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NckipsdQ9ESJ4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
NckipsdQ9ESJ4 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.26■□□□□ 0.67
NckipsdQ9ESJ4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NckipsdQ9ESJ4 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NckipsdQ9ESJ4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NckipsdQ9ESJ4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NckipsdQ9ESJ4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NckipsdQ9ESJ4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
NckipsdQ9ESJ4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NckipsdQ9ESJ4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NckipsdQ9ESJ4 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.25■□□□□ 0.67
NckipsdQ9ESJ4 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
NckipsdQ9ESJ4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NckipsdQ9ESJ4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NckipsdQ9ESJ4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NckipsdQ9ESJ4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NckipsdQ9ESJ4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NckipsdQ9ESJ4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NckipsdQ9ESJ4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NckipsdQ9ESJ4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NckipsdQ9ESJ4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.24■□□□□ 0.67
NckipsdQ9ESJ4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NckipsdQ9ESJ4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NckipsdQ9ESJ4 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
NckipsdQ9ESJ4 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NckipsdQ9ESJ4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NckipsdQ9ESJ4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NckipsdQ9ESJ4 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NckipsdQ9ESJ4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NckipsdQ9ESJ4 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.24■□□□□ 0.67
NckipsdQ9ESJ4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NckipsdQ9ESJ4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NckipsdQ9ESJ4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
NckipsdQ9ESJ4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NckipsdQ9ESJ4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.23■□□□□ 0.67
NckipsdQ9ESJ4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.23■□□□□ 0.67
NckipsdQ9ESJ4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
NckipsdQ9ESJ4 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NckipsdQ9ESJ4 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NckipsdQ9ESJ4 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NckipsdQ9ESJ4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NckipsdQ9ESJ4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NckipsdQ9ESJ4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.22■□□□□ 0.67
NckipsdQ9ESJ4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
NckipsdQ9ESJ4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.22■□□□□ 0.67
NckipsdQ9ESJ4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.22■□□□□ 0.67
NckipsdQ9ESJ4 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms