Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4bQ9ES00 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.8■□□□□ 0.44
Ube4bQ9ES00 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4bQ9ES00 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Ube4bQ9ES00 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4bQ9ES00 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4bQ9ES00 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4bQ9ES00 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4bQ9ES00 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4bQ9ES00 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ube4bQ9ES00 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4bQ9ES00 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4bQ9ES00 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4bQ9ES00 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4bQ9ES00 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4bQ9ES00 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.8■□□□□ 0.44
Ube4bQ9ES00 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4bQ9ES00 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4bQ9ES00 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube4bQ9ES00 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube4bQ9ES00 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube4bQ9ES00 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube4bQ9ES00 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube4bQ9ES00 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube4bQ9ES00 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube4bQ9ES00 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube4bQ9ES00 Gm7417-201ENSMUST00000192950 473 ntBASIC17.79■□□□□ 0.44
Ube4bQ9ES00 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.79■□□□□ 0.44
Ube4bQ9ES00 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ube4bQ9ES00 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ube4bQ9ES00 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Ube4bQ9ES00 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ube4bQ9ES00 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube4bQ9ES00 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube4bQ9ES00 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube4bQ9ES00 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ube4bQ9ES00 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube4bQ9ES00 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube4bQ9ES00 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ube4bQ9ES00 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube4bQ9ES00 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.78■□□□□ 0.44
Ube4bQ9ES00 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.78■□□□□ 0.44
Ube4bQ9ES00 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube4bQ9ES00 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.78■□□□□ 0.44
Ube4bQ9ES00 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Ube4bQ9ES00 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube4bQ9ES00 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube4bQ9ES00 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ube4bQ9ES00 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Ube4bQ9ES00 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ube4bQ9ES00 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ube4bQ9ES00 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Ube4bQ9ES00 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ube4bQ9ES00 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ube4bQ9ES00 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube4bQ9ES00 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube4bQ9ES00 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.76■□□□□ 0.43
Ube4bQ9ES00 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube4bQ9ES00 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube4bQ9ES00 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.76■□□□□ 0.43
Ube4bQ9ES00 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ube4bQ9ES00 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.76■□□□□ 0.43
Ube4bQ9ES00 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ube4bQ9ES00 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.76■□□□□ 0.43
Ube4bQ9ES00 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube4bQ9ES00 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ube4bQ9ES00 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube4bQ9ES00 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube4bQ9ES00 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube4bQ9ES00 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube4bQ9ES00 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ube4bQ9ES00 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ube4bQ9ES00 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube4bQ9ES00 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube4bQ9ES00 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube4bQ9ES00 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.75■□□□□ 0.43
Ube4bQ9ES00 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube4bQ9ES00 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Ube4bQ9ES00 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube4bQ9ES00 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube4bQ9ES00 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube4bQ9ES00 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ube4bQ9ES00 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Ube4bQ9ES00 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube4bQ9ES00 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube4bQ9ES00 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube4bQ9ES00 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube4bQ9ES00 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube4bQ9ES00 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ube4bQ9ES00 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ube4bQ9ES00 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.74■□□□□ 0.43
Ube4bQ9ES00 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ube4bQ9ES00 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ube4bQ9ES00 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ube4bQ9ES00 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ube4bQ9ES00 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ube4bQ9ES00 Etf1-202ENSMUST00000180351 108 ntBASIC17.74■□□□□ 0.43
Ube4bQ9ES00 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ube4bQ9ES00 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ube4bQ9ES00 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms