Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm10013-201ENSMUST00000106074 672 ntBASIC19.11■□□□□ 0.65
Nkx2-4Q9EQM3 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Nkx2-4Q9EQM3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx2-4Q9EQM3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx2-4Q9EQM3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx2-4Q9EQM3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx2-4Q9EQM3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx2-4Q9EQM3 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.1■□□□□ 0.65
Nkx2-4Q9EQM3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx2-4Q9EQM3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx2-4Q9EQM3 Zfp783-201ENSMUST00000095946 670 ntBASIC19.1■□□□□ 0.65
Nkx2-4Q9EQM3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx2-4Q9EQM3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.1■□□□□ 0.65
Nkx2-4Q9EQM3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx2-4Q9EQM3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx2-4Q9EQM3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx2-4Q9EQM3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx2-4Q9EQM3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx2-4Q9EQM3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx2-4Q9EQM3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx2-4Q9EQM3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx2-4Q9EQM3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx2-4Q9EQM3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx2-4Q9EQM3 Gm15375-201ENSMUST00000119510 849 ntBASIC19.09■□□□□ 0.65
Nkx2-4Q9EQM3 Gm6345-202ENSMUST00000180900 204 ntBASIC19.09■□□□□ 0.65
Nkx2-4Q9EQM3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.09■□□□□ 0.65
Nkx2-4Q9EQM3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Nkx2-4Q9EQM3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.09■□□□□ 0.65
Nkx2-4Q9EQM3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nkx2-4Q9EQM3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nkx2-4Q9EQM3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Nkx2-4Q9EQM3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nkx2-4Q9EQM3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Nkx2-4Q9EQM3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nkx2-4Q9EQM3 AA414768-201ENSMUST00000121924 1257 ntBASIC19.08■□□□□ 0.64
Nkx2-4Q9EQM3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.08■□□□□ 0.64
Nkx2-4Q9EQM3 Gm37292-201ENSMUST00000192062 758 ntBASIC19.08■□□□□ 0.64
Nkx2-4Q9EQM3 Gm33142-201ENSMUST00000193913 867 ntBASIC19.08■□□□□ 0.64
Nkx2-4Q9EQM3 Gm18959-201ENSMUST00000208954 655 ntBASIC19.08■□□□□ 0.64
Nkx2-4Q9EQM3 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nkx2-4Q9EQM3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Nkx2-4Q9EQM3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
Nkx2-4Q9EQM3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nkx2-4Q9EQM3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nkx2-4Q9EQM3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nkx2-4Q9EQM3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Nkx2-4Q9EQM3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx2-4Q9EQM3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx2-4Q9EQM3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.07■□□□□ 0.64
Nkx2-4Q9EQM3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx2-4Q9EQM3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx2-4Q9EQM3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx2-4Q9EQM3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx2-4Q9EQM3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx2-4Q9EQM3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.07■□□□□ 0.64
Nkx2-4Q9EQM3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx2-4Q9EQM3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx2-4Q9EQM3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx2-4Q9EQM3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx2-4Q9EQM3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx2-4Q9EQM3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx2-4Q9EQM3 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx2-4Q9EQM3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx2-4Q9EQM3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-4Q9EQM3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-4Q9EQM3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.05■□□□□ 0.64
Nkx2-4Q9EQM3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-4Q9EQM3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-4Q9EQM3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-4Q9EQM3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.05■□□□□ 0.64
Nkx2-4Q9EQM3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.05■□□□□ 0.64
Nkx2-4Q9EQM3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-4Q9EQM3 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-4Q9EQM3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-4Q9EQM3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-4Q9EQM3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-4Q9EQM3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-4Q9EQM3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-4Q9EQM3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-4Q9EQM3 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-4Q9EQM3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-4Q9EQM3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-4Q9EQM3 Gm12382-201ENSMUST00000122005 922 ntBASIC19.04■□□□□ 0.64
Nkx2-4Q9EQM3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-4Q9EQM3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-4Q9EQM3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.04■□□□□ 0.64
Nkx2-4Q9EQM3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-4Q9EQM3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-4Q9EQM3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-4Q9EQM3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-4Q9EQM3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-4Q9EQM3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-4Q9EQM3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-4Q9EQM3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.03■□□□□ 0.64
Nkx2-4Q9EQM3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Nkx2-4Q9EQM3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Nkx2-4Q9EQM3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-4Q9EQM3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.03■□□□□ 0.64
Nkx2-4Q9EQM3 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-4Q9EQM3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms