Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
Nif3l1Q9EQ80 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nif3l1Q9EQ80 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nif3l1Q9EQ80 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nif3l1Q9EQ80 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.41■□□□□ 0.54
Nif3l1Q9EQ80 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nif3l1Q9EQ80 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Nif3l1Q9EQ80 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nif3l1Q9EQ80 Gm27405-201ENSMUST00000184201 112 ntBASIC18.41■□□□□ 0.54
Nif3l1Q9EQ80 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.41■□□□□ 0.54
Nif3l1Q9EQ80 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.41■□□□□ 0.54
Nif3l1Q9EQ80 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nif3l1Q9EQ80 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nif3l1Q9EQ80 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nif3l1Q9EQ80 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nif3l1Q9EQ80 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.4■□□□□ 0.54
Nif3l1Q9EQ80 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nif3l1Q9EQ80 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.4■□□□□ 0.54
Nif3l1Q9EQ80 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nif3l1Q9EQ80 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nif3l1Q9EQ80 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nif3l1Q9EQ80 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nif3l1Q9EQ80 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nif3l1Q9EQ80 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.4■□□□□ 0.54
Nif3l1Q9EQ80 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nif3l1Q9EQ80 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Nif3l1Q9EQ80 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nif3l1Q9EQ80 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Nif3l1Q9EQ80 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nif3l1Q9EQ80 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Nif3l1Q9EQ80 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nif3l1Q9EQ80 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nif3l1Q9EQ80 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nif3l1Q9EQ80 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.39■□□□□ 0.53
Nif3l1Q9EQ80 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nif3l1Q9EQ80 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Nif3l1Q9EQ80 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nif3l1Q9EQ80 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nif3l1Q9EQ80 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nif3l1Q9EQ80 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nif3l1Q9EQ80 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nif3l1Q9EQ80 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.38■□□□□ 0.53
Nif3l1Q9EQ80 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nif3l1Q9EQ80 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nif3l1Q9EQ80 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nif3l1Q9EQ80 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nif3l1Q9EQ80 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Nif3l1Q9EQ80 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.38■□□□□ 0.53
Nif3l1Q9EQ80 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nif3l1Q9EQ80 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nif3l1Q9EQ80 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.38■□□□□ 0.53
Nif3l1Q9EQ80 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nif3l1Q9EQ80 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.38■□□□□ 0.53
Nif3l1Q9EQ80 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.38■□□□□ 0.53
Nif3l1Q9EQ80 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nif3l1Q9EQ80 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nif3l1Q9EQ80 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nif3l1Q9EQ80 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nif3l1Q9EQ80 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nif3l1Q9EQ80 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nif3l1Q9EQ80 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nif3l1Q9EQ80 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.37■□□□□ 0.53
Nif3l1Q9EQ80 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.37■□□□□ 0.53
Nif3l1Q9EQ80 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Nif3l1Q9EQ80 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nif3l1Q9EQ80 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Nif3l1Q9EQ80 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nif3l1Q9EQ80 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nif3l1Q9EQ80 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nif3l1Q9EQ80 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Nif3l1Q9EQ80 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nif3l1Q9EQ80 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nif3l1Q9EQ80 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Nif3l1Q9EQ80 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nif3l1Q9EQ80 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Nif3l1Q9EQ80 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.37■□□□□ 0.53
Nif3l1Q9EQ80 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nif3l1Q9EQ80 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nif3l1Q9EQ80 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nif3l1Q9EQ80 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nif3l1Q9EQ80 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nif3l1Q9EQ80 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.36■□□□□ 0.53
Nif3l1Q9EQ80 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nif3l1Q9EQ80 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
Nif3l1Q9EQ80 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nif3l1Q9EQ80 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.36■□□□□ 0.53
Nif3l1Q9EQ80 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.36■□□□□ 0.53
Nif3l1Q9EQ80 Gm7291-201ENSMUST00000199147 382 ntBASIC18.36■□□□□ 0.53
Nif3l1Q9EQ80 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Nif3l1Q9EQ80 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nif3l1Q9EQ80 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nif3l1Q9EQ80 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nif3l1Q9EQ80 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nif3l1Q9EQ80 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nif3l1Q9EQ80 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nif3l1Q9EQ80 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nif3l1Q9EQ80 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nif3l1Q9EQ80 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nif3l1Q9EQ80 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nif3l1Q9EQ80 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms