Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne8Q9DC53 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne8Q9DC53 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.38■□□□□ 0.69
Cpne8Q9DC53 Fst-202ENSMUST00000223640 2612 ntBASIC19.38■□□□□ 0.69
Cpne8Q9DC53 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne8Q9DC53 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne8Q9DC53 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne8Q9DC53 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne8Q9DC53 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne8Q9DC53 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne8Q9DC53 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cpne8Q9DC53 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.37■□□□□ 0.69
Cpne8Q9DC53 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cpne8Q9DC53 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cpne8Q9DC53 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.37■□□□□ 0.69
Cpne8Q9DC53 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.37■□□□□ 0.69
Cpne8Q9DC53 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.37■□□□□ 0.69
Cpne8Q9DC53 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpne8Q9DC53 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cpne8Q9DC53 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Cpne8Q9DC53 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpne8Q9DC53 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpne8Q9DC53 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpne8Q9DC53 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpne8Q9DC53 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
Cpne8Q9DC53 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cpne8Q9DC53 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cpne8Q9DC53 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpne8Q9DC53 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cpne8Q9DC53 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpne8Q9DC53 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpne8Q9DC53 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpne8Q9DC53 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpne8Q9DC53 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpne8Q9DC53 Gm13534-201ENSMUST00000121169 513 ntBASIC19.35■□□□□ 0.69
Cpne8Q9DC53 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.35■□□□□ 0.69
Cpne8Q9DC53 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpne8Q9DC53 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cpne8Q9DC53 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.35■□□□□ 0.69
Cpne8Q9DC53 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.34■□□□□ 0.69
Cpne8Q9DC53 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpne8Q9DC53 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpne8Q9DC53 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cpne8Q9DC53 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cpne8Q9DC53 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.34■□□□□ 0.69
Cpne8Q9DC53 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.34■□□□□ 0.69
Cpne8Q9DC53 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpne8Q9DC53 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cpne8Q9DC53 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Cpne8Q9DC53 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cpne8Q9DC53 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpne8Q9DC53 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpne8Q9DC53 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cpne8Q9DC53 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cpne8Q9DC53 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cpne8Q9DC53 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cpne8Q9DC53 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cpne8Q9DC53 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cpne8Q9DC53 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.33■□□□□ 0.68
Cpne8Q9DC53 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.33■□□□□ 0.68
Cpne8Q9DC53 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cpne8Q9DC53 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Cpne8Q9DC53 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cpne8Q9DC53 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cpne8Q9DC53 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Cpne8Q9DC53 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Cpne8Q9DC53 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpne8Q9DC53 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cpne8Q9DC53 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpne8Q9DC53 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cpne8Q9DC53 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpne8Q9DC53 Gm13234-201ENSMUST00000120010 747 ntBASIC19.32■□□□□ 0.68
Cpne8Q9DC53 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpne8Q9DC53 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpne8Q9DC53 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.32■□□□□ 0.68
Cpne8Q9DC53 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Cpne8Q9DC53 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpne8Q9DC53 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpne8Q9DC53 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpne8Q9DC53 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpne8Q9DC53 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpne8Q9DC53 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpne8Q9DC53 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpne8Q9DC53 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cpne8Q9DC53 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cpne8Q9DC53 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpne8Q9DC53 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpne8Q9DC53 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Cpne8Q9DC53 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cpne8Q9DC53 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpne8Q9DC53 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpne8Q9DC53 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpne8Q9DC53 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpne8Q9DC53 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpne8Q9DC53 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpne8Q9DC53 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpne8Q9DC53 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Cpne8Q9DC53 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpne8Q9DC53 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpne8Q9DC53 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms