Protein–RNA interactions for Protein: Q9D6T1

Tube1, Tubulin epsilon chain, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tube1Q9D6T1 Grk6-206ENSMUST00000224995 2971 ntBASIC20.62■□□□□ 0.89
Tube1Q9D6T1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tube1Q9D6T1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tube1Q9D6T1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Tube1Q9D6T1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tube1Q9D6T1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Tube1Q9D6T1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tube1Q9D6T1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
Tube1Q9D6T1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.61■□□□□ 0.89
Tube1Q9D6T1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tube1Q9D6T1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tube1Q9D6T1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tube1Q9D6T1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Tube1Q9D6T1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.61■□□□□ 0.89
Tube1Q9D6T1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tube1Q9D6T1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tube1Q9D6T1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Tube1Q9D6T1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tube1Q9D6T1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tube1Q9D6T1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.6■□□□□ 0.89
Tube1Q9D6T1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tube1Q9D6T1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Tube1Q9D6T1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tube1Q9D6T1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tube1Q9D6T1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tube1Q9D6T1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tube1Q9D6T1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tube1Q9D6T1 Gm5408-201ENSMUST00000197998 747 ntBASIC20.6■□□□□ 0.89
Tube1Q9D6T1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tube1Q9D6T1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tube1Q9D6T1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tube1Q9D6T1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.6■□□□□ 0.89
Tube1Q9D6T1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.59■□□□□ 0.89
Tube1Q9D6T1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tube1Q9D6T1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tube1Q9D6T1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tube1Q9D6T1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tube1Q9D6T1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tube1Q9D6T1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Tube1Q9D6T1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tube1Q9D6T1 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.59■□□□□ 0.89
Tube1Q9D6T1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tube1Q9D6T1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tube1Q9D6T1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tube1Q9D6T1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tube1Q9D6T1 Rarb-207ENSMUST00000225921 2756 ntBASIC20.59■□□□□ 0.89
Tube1Q9D6T1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tube1Q9D6T1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.59■□□□□ 0.89
Tube1Q9D6T1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tube1Q9D6T1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tube1Q9D6T1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tube1Q9D6T1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tube1Q9D6T1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.58■□□□□ 0.89
Tube1Q9D6T1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tube1Q9D6T1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Tube1Q9D6T1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Tube1Q9D6T1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tube1Q9D6T1 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.58■□□□□ 0.89
Tube1Q9D6T1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tube1Q9D6T1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tube1Q9D6T1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tube1Q9D6T1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tube1Q9D6T1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tube1Q9D6T1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Tube1Q9D6T1 Gm6211-202ENSMUST00000167849 925 ntBASIC20.58■□□□□ 0.89
Tube1Q9D6T1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tube1Q9D6T1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tube1Q9D6T1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.58■□□□□ 0.89
Tube1Q9D6T1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tube1Q9D6T1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tube1Q9D6T1 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.58■□□□□ 0.88
Tube1Q9D6T1 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.57■□□□□ 0.88
Tube1Q9D6T1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tube1Q9D6T1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tube1Q9D6T1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tube1Q9D6T1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tube1Q9D6T1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tube1Q9D6T1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Tube1Q9D6T1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tube1Q9D6T1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Tube1Q9D6T1 Gm10653-202ENSMUST00000139570 835 ntBASIC20.57■□□□□ 0.88
Tube1Q9D6T1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tube1Q9D6T1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.57■□□□□ 0.88
Tube1Q9D6T1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Tube1Q9D6T1 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.57■□□□□ 0.88
Tube1Q9D6T1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tube1Q9D6T1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tube1Q9D6T1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Tube1Q9D6T1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tube1Q9D6T1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tube1Q9D6T1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tube1Q9D6T1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tube1Q9D6T1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tube1Q9D6T1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tube1Q9D6T1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tube1Q9D6T1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tube1Q9D6T1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tube1Q9D6T1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tube1Q9D6T1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tube1Q9D6T1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms