Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chaf1bQ9D0N7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chaf1bQ9D0N7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chaf1bQ9D0N7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chaf1bQ9D0N7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chaf1bQ9D0N7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chaf1bQ9D0N7 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chaf1bQ9D0N7 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chaf1bQ9D0N7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chaf1bQ9D0N7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
Chaf1bQ9D0N7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.42■□□□□ 0.38
Chaf1bQ9D0N7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chaf1bQ9D0N7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.42■□□□□ 0.38
Chaf1bQ9D0N7 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Chaf1bQ9D0N7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chaf1bQ9D0N7 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chaf1bQ9D0N7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Chaf1bQ9D0N7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chaf1bQ9D0N7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chaf1bQ9D0N7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chaf1bQ9D0N7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chaf1bQ9D0N7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chaf1bQ9D0N7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chaf1bQ9D0N7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chaf1bQ9D0N7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chaf1bQ9D0N7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chaf1bQ9D0N7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.41■□□□□ 0.38
Chaf1bQ9D0N7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chaf1bQ9D0N7 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chaf1bQ9D0N7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chaf1bQ9D0N7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chaf1bQ9D0N7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Chaf1bQ9D0N7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Chaf1bQ9D0N7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chaf1bQ9D0N7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chaf1bQ9D0N7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chaf1bQ9D0N7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chaf1bQ9D0N7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chaf1bQ9D0N7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chaf1bQ9D0N7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Chaf1bQ9D0N7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chaf1bQ9D0N7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chaf1bQ9D0N7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chaf1bQ9D0N7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chaf1bQ9D0N7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chaf1bQ9D0N7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chaf1bQ9D0N7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chaf1bQ9D0N7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.39■□□□□ 0.37
Chaf1bQ9D0N7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chaf1bQ9D0N7 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.39■□□□□ 0.37
Chaf1bQ9D0N7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chaf1bQ9D0N7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.38■□□□□ 0.37
Chaf1bQ9D0N7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chaf1bQ9D0N7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chaf1bQ9D0N7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chaf1bQ9D0N7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chaf1bQ9D0N7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chaf1bQ9D0N7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Chaf1bQ9D0N7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chaf1bQ9D0N7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chaf1bQ9D0N7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.38■□□□□ 0.37
Chaf1bQ9D0N7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chaf1bQ9D0N7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.38■□□□□ 0.37
Chaf1bQ9D0N7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1bQ9D0N7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1bQ9D0N7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1bQ9D0N7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1bQ9D0N7 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Chaf1bQ9D0N7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1bQ9D0N7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Chaf1bQ9D0N7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1bQ9D0N7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1bQ9D0N7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1bQ9D0N7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1bQ9D0N7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1bQ9D0N7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1bQ9D0N7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1bQ9D0N7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1bQ9D0N7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1bQ9D0N7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Chaf1bQ9D0N7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Chaf1bQ9D0N7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1bQ9D0N7 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.36■□□□□ 0.37
Chaf1bQ9D0N7 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.36■□□□□ 0.37
Chaf1bQ9D0N7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chaf1bQ9D0N7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Chaf1bQ9D0N7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chaf1bQ9D0N7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chaf1bQ9D0N7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
Chaf1bQ9D0N7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chaf1bQ9D0N7 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.36■□□□□ 0.37
Chaf1bQ9D0N7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chaf1bQ9D0N7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chaf1bQ9D0N7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chaf1bQ9D0N7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chaf1bQ9D0N7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chaf1bQ9D0N7 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.36■□□□□ 0.37
Chaf1bQ9D0N7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Chaf1bQ9D0N7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.36■□□□□ 0.37
Chaf1bQ9D0N7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms