Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lysmd1Q9D0E3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.01■□□□□ 0.79
Lysmd1Q9D0E3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lysmd1Q9D0E3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lysmd1Q9D0E3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Lysmd1Q9D0E3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lysmd1Q9D0E3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20■□□□□ 0.79
Lysmd1Q9D0E3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lysmd1Q9D0E3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lysmd1Q9D0E3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20■□□□□ 0.79
Lysmd1Q9D0E3 Birc2-201ENSMUST00000054878 378 ntBASIC20■□□□□ 0.79
Lysmd1Q9D0E3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lysmd1Q9D0E3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20■□□□□ 0.79
Lysmd1Q9D0E3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lysmd1Q9D0E3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Lysmd1Q9D0E3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Lysmd1Q9D0E3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lysmd1Q9D0E3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lysmd1Q9D0E3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lysmd1Q9D0E3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Lysmd1Q9D0E3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Lysmd1Q9D0E3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.99■□□□□ 0.79
Lysmd1Q9D0E3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lysmd1Q9D0E3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Lysmd1Q9D0E3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Lysmd1Q9D0E3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lysmd1Q9D0E3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.99■□□□□ 0.79
Lysmd1Q9D0E3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.99■□□□□ 0.79
Lysmd1Q9D0E3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Lysmd1Q9D0E3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lysmd1Q9D0E3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Lysmd1Q9D0E3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lysmd1Q9D0E3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lysmd1Q9D0E3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.98■□□□□ 0.79
Lysmd1Q9D0E3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lysmd1Q9D0E3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lysmd1Q9D0E3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.98■□□□□ 0.79
Lysmd1Q9D0E3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lysmd1Q9D0E3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lysmd1Q9D0E3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Lysmd1Q9D0E3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Lysmd1Q9D0E3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lysmd1Q9D0E3 Gm16061-201ENSMUST00000122167 857 ntBASIC19.98■□□□□ 0.79
Lysmd1Q9D0E3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Lysmd1Q9D0E3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Lysmd1Q9D0E3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
Lysmd1Q9D0E3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
Lysmd1Q9D0E3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Lysmd1Q9D0E3 Gm7370-201ENSMUST00000219471 767 ntBASIC19.98■□□□□ 0.79
Lysmd1Q9D0E3 Gm8784-201ENSMUST00000222096 1435 ntBASIC19.98■□□□□ 0.79
Lysmd1Q9D0E3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Lysmd1Q9D0E3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.98■□□□□ 0.79
Lysmd1Q9D0E3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lysmd1Q9D0E3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Lysmd1Q9D0E3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lysmd1Q9D0E3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lysmd1Q9D0E3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.97■□□□□ 0.79
Lysmd1Q9D0E3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Lysmd1Q9D0E3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lysmd1Q9D0E3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Lysmd1Q9D0E3 Gm5186-201ENSMUST00000218781 920 ntBASIC19.97■□□□□ 0.79
Lysmd1Q9D0E3 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.97■□□□□ 0.79
Lysmd1Q9D0E3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lysmd1Q9D0E3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lysmd1Q9D0E3 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lysmd1Q9D0E3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lysmd1Q9D0E3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lysmd1Q9D0E3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lysmd1Q9D0E3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lysmd1Q9D0E3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.96■□□□□ 0.79
Lysmd1Q9D0E3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lysmd1Q9D0E3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.96■□□□□ 0.79
Lysmd1Q9D0E3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lysmd1Q9D0E3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.96■□□□□ 0.79
Lysmd1Q9D0E3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
Lysmd1Q9D0E3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lysmd1Q9D0E3 Gm38285-201ENSMUST00000192928 922 ntBASIC19.96■□□□□ 0.79
Lysmd1Q9D0E3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lysmd1Q9D0E3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lysmd1Q9D0E3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Lysmd1Q9D0E3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lysmd1Q9D0E3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lysmd1Q9D0E3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lysmd1Q9D0E3 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC19.95■□□□□ 0.78
Lysmd1Q9D0E3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.95■□□□□ 0.78
Lysmd1Q9D0E3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lysmd1Q9D0E3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lysmd1Q9D0E3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.95■□□□□ 0.78
Lysmd1Q9D0E3 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.95■□□□□ 0.78
Lysmd1Q9D0E3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lysmd1Q9D0E3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.94■□□□□ 0.78
Lysmd1Q9D0E3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lysmd1Q9D0E3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lysmd1Q9D0E3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lysmd1Q9D0E3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lysmd1Q9D0E3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lysmd1Q9D0E3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.94■□□□□ 0.78
Lysmd1Q9D0E3 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.94■□□□□ 0.78
Lysmd1Q9D0E3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.94■□□□□ 0.78
Lysmd1Q9D0E3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms