Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chd1lQ9CXF7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Chd1lQ9CXF7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chd1lQ9CXF7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chd1lQ9CXF7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chd1lQ9CXF7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chd1lQ9CXF7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chd1lQ9CXF7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chd1lQ9CXF7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chd1lQ9CXF7 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chd1lQ9CXF7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chd1lQ9CXF7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chd1lQ9CXF7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.92■□□□□ 0.94
Chd1lQ9CXF7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.92■□□□□ 0.94
Chd1lQ9CXF7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chd1lQ9CXF7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Chd1lQ9CXF7 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chd1lQ9CXF7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.92■□□□□ 0.94
Chd1lQ9CXF7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.92■□□□□ 0.94
Chd1lQ9CXF7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd1lQ9CXF7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd1lQ9CXF7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd1lQ9CXF7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd1lQ9CXF7 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.91■□□□□ 0.94
Chd1lQ9CXF7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Chd1lQ9CXF7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.91■□□□□ 0.94
Chd1lQ9CXF7 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.91■□□□□ 0.94
Chd1lQ9CXF7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd1lQ9CXF7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Chd1lQ9CXF7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.91■□□□□ 0.94
Chd1lQ9CXF7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd1lQ9CXF7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd1lQ9CXF7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd1lQ9CXF7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd1lQ9CXF7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd1lQ9CXF7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Chd1lQ9CXF7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.9■□□□□ 0.94
Chd1lQ9CXF7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd1lQ9CXF7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd1lQ9CXF7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.9■□□□□ 0.94
Chd1lQ9CXF7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd1lQ9CXF7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd1lQ9CXF7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd1lQ9CXF7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.9■□□□□ 0.94
Chd1lQ9CXF7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd1lQ9CXF7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Chd1lQ9CXF7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd1lQ9CXF7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd1lQ9CXF7 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.9■□□□□ 0.94
Chd1lQ9CXF7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd1lQ9CXF7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Chd1lQ9CXF7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Chd1lQ9CXF7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.89■□□□□ 0.93
Chd1lQ9CXF7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
Chd1lQ9CXF7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chd1lQ9CXF7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chd1lQ9CXF7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Chd1lQ9CXF7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Chd1lQ9CXF7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chd1lQ9CXF7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Chd1lQ9CXF7 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chd1lQ9CXF7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chd1lQ9CXF7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chd1lQ9CXF7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chd1lQ9CXF7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Chd1lQ9CXF7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chd1lQ9CXF7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chd1lQ9CXF7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chd1lQ9CXF7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chd1lQ9CXF7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.88■□□□□ 0.93
Chd1lQ9CXF7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Chd1lQ9CXF7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Chd1lQ9CXF7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chd1lQ9CXF7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.87■□□□□ 0.93
Chd1lQ9CXF7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Chd1lQ9CXF7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.87■□□□□ 0.93
Chd1lQ9CXF7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Chd1lQ9CXF7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chd1lQ9CXF7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chd1lQ9CXF7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chd1lQ9CXF7 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chd1lQ9CXF7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Chd1lQ9CXF7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chd1lQ9CXF7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chd1lQ9CXF7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Chd1lQ9CXF7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Chd1lQ9CXF7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Chd1lQ9CXF7 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.86■□□□□ 0.93
Chd1lQ9CXF7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chd1lQ9CXF7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Chd1lQ9CXF7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Chd1lQ9CXF7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chd1lQ9CXF7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Chd1lQ9CXF7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.86■□□□□ 0.93
Chd1lQ9CXF7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chd1lQ9CXF7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chd1lQ9CXF7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chd1lQ9CXF7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chd1lQ9CXF7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chd1lQ9CXF7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms