Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc43Q9CR29 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
Ccdc43Q9CR29 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc43Q9CR29 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc43Q9CR29 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.58■□□□□ 0.89
Ccdc43Q9CR29 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc43Q9CR29 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.58■□□□□ 0.89
Ccdc43Q9CR29 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc43Q9CR29 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc43Q9CR29 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc43Q9CR29 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc43Q9CR29 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc43Q9CR29 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc43Q9CR29 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc43Q9CR29 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc43Q9CR29 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Ccdc43Q9CR29 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc43Q9CR29 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.57■□□□□ 0.88
Ccdc43Q9CR29 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc43Q9CR29 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc43Q9CR29 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc43Q9CR29 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc43Q9CR29 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Ccdc43Q9CR29 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc43Q9CR29 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc43Q9CR29 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc43Q9CR29 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Ccdc43Q9CR29 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc43Q9CR29 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc43Q9CR29 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc43Q9CR29 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.56■□□□□ 0.88
Ccdc43Q9CR29 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc43Q9CR29 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc43Q9CR29 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc43Q9CR29 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc43Q9CR29 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc43Q9CR29 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc43Q9CR29 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Ccdc43Q9CR29 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc43Q9CR29 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.55■□□□□ 0.88
Ccdc43Q9CR29 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc43Q9CR29 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc43Q9CR29 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.55■□□□□ 0.88
Ccdc43Q9CR29 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc43Q9CR29 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Ccdc43Q9CR29 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc43Q9CR29 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc43Q9CR29 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc43Q9CR29 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc43Q9CR29 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ccdc43Q9CR29 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc43Q9CR29 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc43Q9CR29 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc43Q9CR29 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc43Q9CR29 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc43Q9CR29 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.54■□□□□ 0.88
Ccdc43Q9CR29 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.54■□□□□ 0.88
Ccdc43Q9CR29 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc43Q9CR29 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc43Q9CR29 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ccdc43Q9CR29 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc43Q9CR29 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc43Q9CR29 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc43Q9CR29 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc43Q9CR29 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ccdc43Q9CR29 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc43Q9CR29 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc43Q9CR29 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.53■□□□□ 0.88
Ccdc43Q9CR29 Gm38205-201ENSMUST00000192243 258 ntBASIC20.53■□□□□ 0.88
Ccdc43Q9CR29 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.53■□□□□ 0.88
Ccdc43Q9CR29 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.53■□□□□ 0.88
Ccdc43Q9CR29 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc43Q9CR29 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc43Q9CR29 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ccdc43Q9CR29 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc43Q9CR29 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc43Q9CR29 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc43Q9CR29 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Ccdc43Q9CR29 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc43Q9CR29 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc43Q9CR29 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc43Q9CR29 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Ccdc43Q9CR29 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc43Q9CR29 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc43Q9CR29 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc43Q9CR29 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc43Q9CR29 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc43Q9CR29 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.52■□□□□ 0.88
Ccdc43Q9CR29 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ccdc43Q9CR29 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Ccdc43Q9CR29 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc43Q9CR29 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc43Q9CR29 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Ccdc43Q9CR29 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ccdc43Q9CR29 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc43Q9CR29 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc43Q9CR29 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc43Q9CR29 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc43Q9CR29 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc43Q9CR29 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms