Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chchd1Q9CQA6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chchd1Q9CQA6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chchd1Q9CQA6 Mir6236-201ENSMUST00000184437 123 ntBASIC14.07□□□□□ -0.16
Chchd1Q9CQA6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chchd1Q9CQA6 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chchd1Q9CQA6 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chchd1Q9CQA6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chchd1Q9CQA6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.07□□□□□ -0.16
Chchd1Q9CQA6 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chchd1Q9CQA6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chchd1Q9CQA6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Chchd1Q9CQA6 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chchd1Q9CQA6 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chchd1Q9CQA6 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chchd1Q9CQA6 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Chchd1Q9CQA6 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Chchd1Q9CQA6 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chchd1Q9CQA6 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chchd1Q9CQA6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chchd1Q9CQA6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Chchd1Q9CQA6 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chchd1Q9CQA6 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.06□□□□□ -0.16
Chchd1Q9CQA6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chchd1Q9CQA6 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chchd1Q9CQA6 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chchd1Q9CQA6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chchd1Q9CQA6 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.05□□□□□ -0.16
Chchd1Q9CQA6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
Chchd1Q9CQA6 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Chchd1Q9CQA6 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chchd1Q9CQA6 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chchd1Q9CQA6 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chchd1Q9CQA6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chchd1Q9CQA6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chchd1Q9CQA6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chchd1Q9CQA6 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chchd1Q9CQA6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chchd1Q9CQA6 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Chchd1Q9CQA6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chchd1Q9CQA6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chchd1Q9CQA6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chchd1Q9CQA6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chchd1Q9CQA6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chchd1Q9CQA6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.05□□□□□ -0.16
Chchd1Q9CQA6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chchd1Q9CQA6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chchd1Q9CQA6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chchd1Q9CQA6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chchd1Q9CQA6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chchd1Q9CQA6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chchd1Q9CQA6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chchd1Q9CQA6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chchd1Q9CQA6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Chchd1Q9CQA6 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chchd1Q9CQA6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chchd1Q9CQA6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chchd1Q9CQA6 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chchd1Q9CQA6 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chchd1Q9CQA6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.04□□□□□ -0.16
Chchd1Q9CQA6 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Chchd1Q9CQA6 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chchd1Q9CQA6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Chchd1Q9CQA6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chchd1Q9CQA6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chchd1Q9CQA6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Chchd1Q9CQA6 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Chchd1Q9CQA6 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chchd1Q9CQA6 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chchd1Q9CQA6 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chchd1Q9CQA6 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chchd1Q9CQA6 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chchd1Q9CQA6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chchd1Q9CQA6 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chchd1Q9CQA6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chchd1Q9CQA6 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chchd1Q9CQA6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chchd1Q9CQA6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chchd1Q9CQA6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Chchd1Q9CQA6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chchd1Q9CQA6 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.03□□□□□ -0.16
Chchd1Q9CQA6 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Chchd1Q9CQA6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chchd1Q9CQA6 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chchd1Q9CQA6 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chchd1Q9CQA6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chchd1Q9CQA6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chchd1Q9CQA6 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chchd1Q9CQA6 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.03□□□□□ -0.16
Chchd1Q9CQA6 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chchd1Q9CQA6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chchd1Q9CQA6 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chchd1Q9CQA6 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chchd1Q9CQA6 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chchd1Q9CQA6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chchd1Q9CQA6 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chchd1Q9CQA6 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chchd1Q9CQA6 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chchd1Q9CQA6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chchd1Q9CQA6 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms