Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb1Q9CQ70 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1Q9CQ70 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1Q9CQ70 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1Q9CQ70 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1Q9CQ70 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
H2afb1Q9CQ70 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC15.16■□□□□ 0.02
H2afb1Q9CQ70 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.16■□□□□ 0.02
H2afb1Q9CQ70 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.16■□□□□ 0.02
H2afb1Q9CQ70 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1Q9CQ70 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
H2afb1Q9CQ70 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1Q9CQ70 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.16■□□□□ 0.02
H2afb1Q9CQ70 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1Q9CQ70 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.16■□□□□ 0.02
H2afb1Q9CQ70 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
H2afb1Q9CQ70 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1Q9CQ70 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1Q9CQ70 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1Q9CQ70 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1Q9CQ70 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
H2afb1Q9CQ70 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
H2afb1Q9CQ70 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1Q9CQ70 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1Q9CQ70 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1Q9CQ70 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1Q9CQ70 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1Q9CQ70 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
H2afb1Q9CQ70 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1Q9CQ70 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1Q9CQ70 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.15■□□□□ 0.02
H2afb1Q9CQ70 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.15■□□□□ 0.02
H2afb1Q9CQ70 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.15■□□□□ 0.02
H2afb1Q9CQ70 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.15■□□□□ 0.02
H2afb1Q9CQ70 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1Q9CQ70 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1Q9CQ70 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1Q9CQ70 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1Q9CQ70 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1Q9CQ70 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1Q9CQ70 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1Q9CQ70 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
H2afb1Q9CQ70 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1Q9CQ70 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1Q9CQ70 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1Q9CQ70 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1Q9CQ70 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1Q9CQ70 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1Q9CQ70 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1Q9CQ70 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
H2afb1Q9CQ70 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1Q9CQ70 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1Q9CQ70 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.14■□□□□ 0.01
H2afb1Q9CQ70 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1Q9CQ70 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1Q9CQ70 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1Q9CQ70 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
H2afb1Q9CQ70 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
H2afb1Q9CQ70 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.14■□□□□ 0.01
H2afb1Q9CQ70 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1Q9CQ70 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1Q9CQ70 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1Q9CQ70 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1Q9CQ70 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.14■□□□□ 0.01
H2afb1Q9CQ70 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1Q9CQ70 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1Q9CQ70 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1Q9CQ70 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.14■□□□□ 0.01
H2afb1Q9CQ70 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1Q9CQ70 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
H2afb1Q9CQ70 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1Q9CQ70 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
H2afb1Q9CQ70 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1Q9CQ70 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
H2afb1Q9CQ70 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1Q9CQ70 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1Q9CQ70 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
H2afb1Q9CQ70 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1Q9CQ70 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1Q9CQ70 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.13■□□□□ 0.01
H2afb1Q9CQ70 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1Q9CQ70 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.13■□□□□ 0.01
H2afb1Q9CQ70 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
H2afb1Q9CQ70 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1Q9CQ70 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1Q9CQ70 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1Q9CQ70 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1Q9CQ70 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1Q9CQ70 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1Q9CQ70 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1Q9CQ70 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb1Q9CQ70 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb1Q9CQ70 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
H2afb1Q9CQ70 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
H2afb1Q9CQ70 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb1Q9CQ70 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb1Q9CQ70 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
H2afb1Q9CQ70 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.12■□□□□ 0.01
H2afb1Q9CQ70 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
H2afb1Q9CQ70 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms