Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.72■□□□□ 0.27
Krt88Q9CPR6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Krt88Q9CPR6 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Krt88Q9CPR6 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Krt88Q9CPR6 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Krt88Q9CPR6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.72■□□□□ 0.27
Krt88Q9CPR6 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Krt88Q9CPR6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Krt88Q9CPR6 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Krt88Q9CPR6 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Krt88Q9CPR6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Krt88Q9CPR6 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Krt88Q9CPR6 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Krt88Q9CPR6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Krt88Q9CPR6 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.71■□□□□ 0.27
Krt88Q9CPR6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.71■□□□□ 0.27
Krt88Q9CPR6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Krt88Q9CPR6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Krt88Q9CPR6 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Krt88Q9CPR6 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Krt88Q9CPR6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Krt88Q9CPR6 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Krt88Q9CPR6 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Krt88Q9CPR6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.7■□□□□ 0.26
Krt88Q9CPR6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.7■□□□□ 0.26
Krt88Q9CPR6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.7■□□□□ 0.26
Krt88Q9CPR6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.7■□□□□ 0.26
Krt88Q9CPR6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Krt88Q9CPR6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Krt88Q9CPR6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Krt88Q9CPR6 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Krt88Q9CPR6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Krt88Q9CPR6 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Krt88Q9CPR6 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Krt88Q9CPR6 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Krt88Q9CPR6 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Krt88Q9CPR6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Krt88Q9CPR6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Krt88Q9CPR6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Krt88Q9CPR6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Krt88Q9CPR6 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Krt88Q9CPR6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Krt88Q9CPR6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Krt88Q9CPR6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Krt88Q9CPR6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.69■□□□□ 0.26
Krt88Q9CPR6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.69■□□□□ 0.26
Krt88Q9CPR6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Krt88Q9CPR6 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Krt88Q9CPR6 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Krt88Q9CPR6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Krt88Q9CPR6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Krt88Q9CPR6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Krt88Q9CPR6 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Krt88Q9CPR6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Krt88Q9CPR6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Krt88Q9CPR6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.68■□□□□ 0.26
Krt88Q9CPR6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Krt88Q9CPR6 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Krt88Q9CPR6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Krt88Q9CPR6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.68■□□□□ 0.26
Krt88Q9CPR6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Krt88Q9CPR6 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Krt88Q9CPR6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.67■□□□□ 0.26
Krt88Q9CPR6 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Krt88Q9CPR6 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Krt88Q9CPR6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Krt88Q9CPR6 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Krt88Q9CPR6 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Krt88Q9CPR6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.67■□□□□ 0.26
Krt88Q9CPR6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Krt88Q9CPR6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Krt88Q9CPR6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Krt88Q9CPR6 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Krt88Q9CPR6 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.67■□□□□ 0.26
Krt88Q9CPR6 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Krt88Q9CPR6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.67■□□□□ 0.26
Krt88Q9CPR6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Krt88Q9CPR6 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Krt88Q9CPR6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Krt88Q9CPR6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Krt88Q9CPR6 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Krt88Q9CPR6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Krt88Q9CPR6 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.66■□□□□ 0.26
Krt88Q9CPR6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Krt88Q9CPR6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Krt88Q9CPR6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Krt88Q9CPR6 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Krt88Q9CPR6 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Krt88Q9CPR6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Krt88Q9CPR6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Krt88Q9CPR6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Krt88Q9CPR6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Krt88Q9CPR6 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Krt88Q9CPR6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.65■□□□□ 0.26
Krt88Q9CPR6 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.65■□□□□ 0.26
Krt88Q9CPR6 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Krt88Q9CPR6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Krt88Q9CPR6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Krt88Q9CPR6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Krt88Q9CPR6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms