Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.06■□□□□ 0.48
Trim16Q99PP9 Gm5874-201ENSMUST00000096101 508 ntBASIC18.06■□□□□ 0.48
Trim16Q99PP9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim16Q99PP9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim16Q99PP9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim16Q99PP9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim16Q99PP9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.06■□□□□ 0.48
Trim16Q99PP9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Trim16Q99PP9 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.05■□□□□ 0.48
Trim16Q99PP9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim16Q99PP9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim16Q99PP9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim16Q99PP9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Trim16Q99PP9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trim16Q99PP9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.05■□□□□ 0.48
Trim16Q99PP9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim16Q99PP9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Trim16Q99PP9 Gm9988-201ENSMUST00000069786 435 ntBASIC18.05■□□□□ 0.48
Trim16Q99PP9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim16Q99PP9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim16Q99PP9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.05■□□□□ 0.48
Trim16Q99PP9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.05■□□□□ 0.48
Trim16Q99PP9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim16Q99PP9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim16Q99PP9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.04■□□□□ 0.48
Trim16Q99PP9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim16Q99PP9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim16Q99PP9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim16Q99PP9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim16Q99PP9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim16Q99PP9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.04■□□□□ 0.48
Trim16Q99PP9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim16Q99PP9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim16Q99PP9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Trim16Q99PP9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim16Q99PP9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Trim16Q99PP9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim16Q99PP9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim16Q99PP9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim16Q99PP9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim16Q99PP9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trim16Q99PP9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trim16Q99PP9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim16Q99PP9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim16Q99PP9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trim16Q99PP9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim16Q99PP9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim16Q99PP9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim16Q99PP9 Gm8495-201ENSMUST00000188740 694 ntBASIC18.03■□□□□ 0.48
Trim16Q99PP9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim16Q99PP9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim16Q99PP9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim16Q99PP9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim16Q99PP9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Trim16Q99PP9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Trim16Q99PP9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim16Q99PP9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim16Q99PP9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Trim16Q99PP9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim16Q99PP9 Reep4-203ENSMUST00000226563 1444 ntBASIC18.02■□□□□ 0.48
Trim16Q99PP9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim16Q99PP9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim16Q99PP9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim16Q99PP9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim16Q99PP9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim16Q99PP9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim16Q99PP9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim16Q99PP9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim16Q99PP9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim16Q99PP9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim16Q99PP9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim16Q99PP9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim16Q99PP9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim16Q99PP9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim16Q99PP9 Rarb-207ENSMUST00000225921 2756 ntBASIC18.01■□□□□ 0.47
Trim16Q99PP9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim16Q99PP9 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.01■□□□□ 0.47
Trim16Q99PP9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim16Q99PP9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim16Q99PP9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim16Q99PP9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim16Q99PP9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim16Q99PP9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trim16Q99PP9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim16Q99PP9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim16Q99PP9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim16Q99PP9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim16Q99PP9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim16Q99PP9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim16Q99PP9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18■□□□□ 0.47
Trim16Q99PP9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Trim16Q99PP9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
Trim16Q99PP9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Trim16Q99PP9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim16Q99PP9 Gm7860-201ENSMUST00000121190 879 ntBASIC18■□□□□ 0.47
Trim16Q99PP9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Trim16Q99PP9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trim16Q99PP9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim16Q99PP9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim16Q99PP9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms