Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim33Q99PP7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim33Q99PP7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.3■□□□□ 0.52
Trim33Q99PP7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trim33Q99PP7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Trim33Q99PP7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.3■□□□□ 0.52
Trim33Q99PP7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.3■□□□□ 0.52
Trim33Q99PP7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim33Q99PP7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim33Q99PP7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim33Q99PP7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim33Q99PP7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim33Q99PP7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim33Q99PP7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim33Q99PP7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Trim33Q99PP7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim33Q99PP7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim33Q99PP7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim33Q99PP7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim33Q99PP7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim33Q99PP7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim33Q99PP7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim33Q99PP7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim33Q99PP7 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim33Q99PP7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim33Q99PP7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim33Q99PP7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim33Q99PP7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim33Q99PP7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Trim33Q99PP7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.28■□□□□ 0.52
Trim33Q99PP7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim33Q99PP7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim33Q99PP7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trim33Q99PP7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Trim33Q99PP7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim33Q99PP7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.28■□□□□ 0.52
Trim33Q99PP7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim33Q99PP7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim33Q99PP7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim33Q99PP7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Trim33Q99PP7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Trim33Q99PP7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim33Q99PP7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim33Q99PP7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim33Q99PP7 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim33Q99PP7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim33Q99PP7 Gm27405-201ENSMUST00000184201 112 ntBASIC18.27■□□□□ 0.52
Trim33Q99PP7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.27■□□□□ 0.52
Trim33Q99PP7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim33Q99PP7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim33Q99PP7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim33Q99PP7 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.27■□□□□ 0.51
Trim33Q99PP7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim33Q99PP7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim33Q99PP7 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Trim33Q99PP7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim33Q99PP7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim33Q99PP7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim33Q99PP7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim33Q99PP7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim33Q99PP7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim33Q99PP7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim33Q99PP7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim33Q99PP7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim33Q99PP7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim33Q99PP7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.26■□□□□ 0.51
Trim33Q99PP7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trim33Q99PP7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim33Q99PP7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trim33Q99PP7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim33Q99PP7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trim33Q99PP7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim33Q99PP7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim33Q99PP7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim33Q99PP7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim33Q99PP7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim33Q99PP7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim33Q99PP7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trim33Q99PP7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim33Q99PP7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.25■□□□□ 0.51
Trim33Q99PP7 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.25■□□□□ 0.51
Trim33Q99PP7 Gm6420-201ENSMUST00000193885 723 ntBASIC18.25■□□□□ 0.51
Trim33Q99PP7 Gm7291-201ENSMUST00000199147 382 ntBASIC18.25■□□□□ 0.51
Trim33Q99PP7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.25■□□□□ 0.51
Trim33Q99PP7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim33Q99PP7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim33Q99PP7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim33Q99PP7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim33Q99PP7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim33Q99PP7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim33Q99PP7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim33Q99PP7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trim33Q99PP7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim33Q99PP7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim33Q99PP7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.24■□□□□ 0.51
Trim33Q99PP7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim33Q99PP7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.24■□□□□ 0.51
Trim33Q99PP7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim33Q99PP7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.24■□□□□ 0.51
Trim33Q99PP7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms