Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gtf2ird2Q99NI3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Gtf2ird2Q99NI3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
Gtf2ird2Q99NI3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Gtf2ird2Q99NI3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
Gtf2ird2Q99NI3 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.01■□□□□ 0.63
Gtf2ird2Q99NI3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Gtf2ird2Q99NI3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gtf2ird2Q99NI3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gtf2ird2Q99NI3 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.01■□□□□ 0.63
Gtf2ird2Q99NI3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Gtf2ird2Q99NI3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gtf2ird2Q99NI3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Gtf2ird2Q99NI3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Gtf2ird2Q99NI3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Gtf2ird2Q99NI3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Gtf2ird2Q99NI3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Gtf2ird2Q99NI3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gtf2ird2Q99NI3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gtf2ird2Q99NI3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gtf2ird2Q99NI3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Gtf2ird2Q99NI3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gtf2ird2Q99NI3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gtf2ird2Q99NI3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gtf2ird2Q99NI3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19■□□□□ 0.63
Gtf2ird2Q99NI3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19■□□□□ 0.63
Gtf2ird2Q99NI3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19■□□□□ 0.63
Gtf2ird2Q99NI3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19■□□□□ 0.63
Gtf2ird2Q99NI3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19■□□□□ 0.63
Gtf2ird2Q99NI3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gtf2ird2Q99NI3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gtf2ird2Q99NI3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gtf2ird2Q99NI3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19■□□□□ 0.63
Gtf2ird2Q99NI3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Gtf2ird2Q99NI3 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gtf2ird2Q99NI3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gtf2ird2Q99NI3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gtf2ird2Q99NI3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gtf2ird2Q99NI3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Gtf2ird2Q99NI3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gtf2ird2Q99NI3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Gtf2ird2Q99NI3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.99■□□□□ 0.63
Gtf2ird2Q99NI3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gtf2ird2Q99NI3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Gtf2ird2Q99NI3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gtf2ird2Q99NI3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Gtf2ird2Q99NI3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.99■□□□□ 0.63
Gtf2ird2Q99NI3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gtf2ird2Q99NI3 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.99■□□□□ 0.63
Gtf2ird2Q99NI3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gtf2ird2Q99NI3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gtf2ird2Q99NI3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Gtf2ird2Q99NI3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gtf2ird2Q99NI3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gtf2ird2Q99NI3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gtf2ird2Q99NI3 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.98■□□□□ 0.63
Gtf2ird2Q99NI3 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.98■□□□□ 0.63
Gtf2ird2Q99NI3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Gtf2ird2Q99NI3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Gtf2ird2Q99NI3 Rab3c-203ENSMUST00000224180 967 ntBASIC18.98■□□□□ 0.63
Gtf2ird2Q99NI3 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.98■□□□□ 0.63
Gtf2ird2Q99NI3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gtf2ird2Q99NI3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gtf2ird2Q99NI3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gtf2ird2Q99NI3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Gtf2ird2Q99NI3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Gtf2ird2Q99NI3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.97■□□□□ 0.63
Gtf2ird2Q99NI3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gtf2ird2Q99NI3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gtf2ird2Q99NI3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Gtf2ird2Q99NI3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.97■□□□□ 0.63
Gtf2ird2Q99NI3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gtf2ird2Q99NI3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Gtf2ird2Q99NI3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.97■□□□□ 0.63
Gtf2ird2Q99NI3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gtf2ird2Q99NI3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Gtf2ird2Q99NI3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Gtf2ird2Q99NI3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gtf2ird2Q99NI3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gtf2ird2Q99NI3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Gtf2ird2Q99NI3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gtf2ird2Q99NI3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gtf2ird2Q99NI3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Gtf2ird2Q99NI3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.96■□□□□ 0.63
Gtf2ird2Q99NI3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.96■□□□□ 0.63
Gtf2ird2Q99NI3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gtf2ird2Q99NI3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.96■□□□□ 0.63
Gtf2ird2Q99NI3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gtf2ird2Q99NI3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gtf2ird2Q99NI3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Gtf2ird2Q99NI3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gtf2ird2Q99NI3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Gtf2ird2Q99NI3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gtf2ird2Q99NI3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gtf2ird2Q99NI3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gtf2ird2Q99NI3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.95■□□□□ 0.62
Gtf2ird2Q99NI3 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.95■□□□□ 0.62
Gtf2ird2Q99NI3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gtf2ird2Q99NI3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Gtf2ird2Q99NI3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms