Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.37■□□□□ 0.69
Tpgs1Q99MS8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tpgs1Q99MS8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tpgs1Q99MS8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.37■□□□□ 0.69
Tpgs1Q99MS8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tpgs1Q99MS8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tpgs1Q99MS8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Tpgs1Q99MS8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tpgs1Q99MS8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tpgs1Q99MS8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpgs1Q99MS8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpgs1Q99MS8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpgs1Q99MS8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Tpgs1Q99MS8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tpgs1Q99MS8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpgs1Q99MS8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpgs1Q99MS8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Tpgs1Q99MS8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Tpgs1Q99MS8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpgs1Q99MS8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Tpgs1Q99MS8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpgs1Q99MS8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpgs1Q99MS8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpgs1Q99MS8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpgs1Q99MS8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Tpgs1Q99MS8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.35■□□□□ 0.69
Tpgs1Q99MS8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Tpgs1Q99MS8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpgs1Q99MS8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpgs1Q99MS8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Tpgs1Q99MS8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tpgs1Q99MS8 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.34■□□□□ 0.69
Tpgs1Q99MS8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.34■□□□□ 0.69
Tpgs1Q99MS8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tpgs1Q99MS8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tpgs1Q99MS8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.34■□□□□ 0.69
Tpgs1Q99MS8 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.34■□□□□ 0.69
Tpgs1Q99MS8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tpgs1Q99MS8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tpgs1Q99MS8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tpgs1Q99MS8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.34■□□□□ 0.69
Tpgs1Q99MS8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tpgs1Q99MS8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tpgs1Q99MS8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tpgs1Q99MS8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tpgs1Q99MS8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.34■□□□□ 0.69
Tpgs1Q99MS8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tpgs1Q99MS8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tpgs1Q99MS8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tpgs1Q99MS8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tpgs1Q99MS8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Tpgs1Q99MS8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.33■□□□□ 0.69
Tpgs1Q99MS8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.33■□□□□ 0.69
Tpgs1Q99MS8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tpgs1Q99MS8 Iqck-206ENSMUST00000208658 2891 ntBASIC19.33■□□□□ 0.69
Tpgs1Q99MS8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tpgs1Q99MS8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tpgs1Q99MS8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tpgs1Q99MS8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.33■□□□□ 0.68
Tpgs1Q99MS8 Rab3c-203ENSMUST00000224180 967 ntBASIC19.33■□□□□ 0.68
Tpgs1Q99MS8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tpgs1Q99MS8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tpgs1Q99MS8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tpgs1Q99MS8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tpgs1Q99MS8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.33■□□□□ 0.68
Tpgs1Q99MS8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.33■□□□□ 0.68
Tpgs1Q99MS8 Golph3-205ENSMUST00000228671 2842 ntBASIC19.33■□□□□ 0.68
Tpgs1Q99MS8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tpgs1Q99MS8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tpgs1Q99MS8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpgs1Q99MS8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpgs1Q99MS8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Tpgs1Q99MS8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpgs1Q99MS8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpgs1Q99MS8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tpgs1Q99MS8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.32■□□□□ 0.68
Tpgs1Q99MS8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpgs1Q99MS8 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.32■□□□□ 0.68
Tpgs1Q99MS8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpgs1Q99MS8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpgs1Q99MS8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Tpgs1Q99MS8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpgs1Q99MS8 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.31■□□□□ 0.68
Tpgs1Q99MS8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpgs1Q99MS8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tpgs1Q99MS8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpgs1Q99MS8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpgs1Q99MS8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpgs1Q99MS8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Tpgs1Q99MS8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpgs1Q99MS8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpgs1Q99MS8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpgs1Q99MS8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpgs1Q99MS8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpgs1Q99MS8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpgs1Q99MS8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tpgs1Q99MS8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpgs1Q99MS8 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.29■□□□□ 0.68
Tpgs1Q99MS8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.29■□□□□ 0.68
Tpgs1Q99MS8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms