Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.39■□□□□ 0.37
Nkx6-1Q99MA9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Nkx6-1Q99MA9 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx6-1Q99MA9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx6-1Q99MA9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx6-1Q99MA9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx6-1Q99MA9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx6-1Q99MA9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx6-1Q99MA9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Nkx6-1Q99MA9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Nkx6-1Q99MA9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx6-1Q99MA9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx6-1Q99MA9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.38■□□□□ 0.37
Nkx6-1Q99MA9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx6-1Q99MA9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.38■□□□□ 0.37
Nkx6-1Q99MA9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.38■□□□□ 0.37
Nkx6-1Q99MA9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx6-1Q99MA9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Nkx6-1Q99MA9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx6-1Q99MA9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx6-1Q99MA9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx6-1Q99MA9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx6-1Q99MA9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.38■□□□□ 0.37
Nkx6-1Q99MA9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx6-1Q99MA9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx6-1Q99MA9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx6-1Q99MA9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx6-1Q99MA9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx6-1Q99MA9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx6-1Q99MA9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx6-1Q99MA9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.37■□□□□ 0.37
Nkx6-1Q99MA9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx6-1Q99MA9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx6-1Q99MA9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx6-1Q99MA9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx6-1Q99MA9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx6-1Q99MA9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Nkx6-1Q99MA9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Nkx6-1Q99MA9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx6-1Q99MA9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Nkx6-1Q99MA9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx6-1Q99MA9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx6-1Q99MA9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.36■□□□□ 0.37
Nkx6-1Q99MA9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.36■□□□□ 0.37
Nkx6-1Q99MA9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.36■□□□□ 0.37
Nkx6-1Q99MA9 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.36■□□□□ 0.37
Nkx6-1Q99MA9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx6-1Q99MA9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx6-1Q99MA9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx6-1Q99MA9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx6-1Q99MA9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx6-1Q99MA9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx6-1Q99MA9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx6-1Q99MA9 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.36■□□□□ 0.37
Nkx6-1Q99MA9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx6-1Q99MA9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Nkx6-1Q99MA9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx6-1Q99MA9 Gm43183-201ENSMUST00000200632 547 ntBASIC17.35■□□□□ 0.37
Nkx6-1Q99MA9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx6-1Q99MA9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Nkx6-1Q99MA9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx6-1Q99MA9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx6-1Q99MA9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx6-1Q99MA9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx6-1Q99MA9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nkx6-1Q99MA9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx6-1Q99MA9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx6-1Q99MA9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx6-1Q99MA9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx6-1Q99MA9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx6-1Q99MA9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Nkx6-1Q99MA9 Mtag2-201ENSMUST00000058665 714 ntBASIC17.34■□□□□ 0.37
Nkx6-1Q99MA9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx6-1Q99MA9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx6-1Q99MA9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx6-1Q99MA9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Nkx6-1Q99MA9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.33■□□□□ 0.37
Nkx6-1Q99MA9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx6-1Q99MA9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx6-1Q99MA9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Nkx6-1Q99MA9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Nkx6-1Q99MA9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.33■□□□□ 0.36
Nkx6-1Q99MA9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.33■□□□□ 0.36
Nkx6-1Q99MA9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx6-1Q99MA9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx6-1Q99MA9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx6-1Q99MA9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Nkx6-1Q99MA9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx6-1Q99MA9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx6-1Q99MA9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx6-1Q99MA9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx6-1Q99MA9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx6-1Q99MA9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx6-1Q99MA9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx6-1Q99MA9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx6-1Q99MA9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx6-1Q99MA9 Gm21814-202ENSMUST00000203277 873 ntBASIC17.32■□□□□ 0.36
Nkx6-1Q99MA9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx6-1Q99MA9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Nkx6-1Q99MA9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms