Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cttnbp2nlQ99LJ0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cttnbp2nlQ99LJ0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cttnbp2nlQ99LJ0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cttnbp2nlQ99LJ0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cttnbp2nlQ99LJ0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Cttnbp2nlQ99LJ0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cttnbp2nlQ99LJ0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cttnbp2nlQ99LJ0 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.7■□□□□ 0.58
Cttnbp2nlQ99LJ0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Cttnbp2nlQ99LJ0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cttnbp2nlQ99LJ0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cttnbp2nlQ99LJ0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cttnbp2nlQ99LJ0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cttnbp2nlQ99LJ0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cttnbp2nlQ99LJ0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cttnbp2nlQ99LJ0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cttnbp2nlQ99LJ0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cttnbp2nlQ99LJ0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cttnbp2nlQ99LJ0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cttnbp2nlQ99LJ0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cttnbp2nlQ99LJ0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cttnbp2nlQ99LJ0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cttnbp2nlQ99LJ0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cttnbp2nlQ99LJ0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cttnbp2nlQ99LJ0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cttnbp2nlQ99LJ0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cttnbp2nlQ99LJ0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cttnbp2nlQ99LJ0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cttnbp2nlQ99LJ0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Cttnbp2nlQ99LJ0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cttnbp2nlQ99LJ0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cttnbp2nlQ99LJ0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Cttnbp2nlQ99LJ0 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.69■□□□□ 0.58
Cttnbp2nlQ99LJ0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cttnbp2nlQ99LJ0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cttnbp2nlQ99LJ0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cttnbp2nlQ99LJ0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cttnbp2nlQ99LJ0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cttnbp2nlQ99LJ0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cttnbp2nlQ99LJ0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cttnbp2nlQ99LJ0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cttnbp2nlQ99LJ0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cttnbp2nlQ99LJ0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cttnbp2nlQ99LJ0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cttnbp2nlQ99LJ0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cttnbp2nlQ99LJ0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cttnbp2nlQ99LJ0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Cttnbp2nlQ99LJ0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cttnbp2nlQ99LJ0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Cttnbp2nlQ99LJ0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cttnbp2nlQ99LJ0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cttnbp2nlQ99LJ0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.67■□□□□ 0.58
Cttnbp2nlQ99LJ0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cttnbp2nlQ99LJ0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cttnbp2nlQ99LJ0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.67■□□□□ 0.58
Cttnbp2nlQ99LJ0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.67■□□□□ 0.58
Cttnbp2nlQ99LJ0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cttnbp2nlQ99LJ0 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.67■□□□□ 0.58
Cttnbp2nlQ99LJ0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cttnbp2nlQ99LJ0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cttnbp2nlQ99LJ0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cttnbp2nlQ99LJ0 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.66■□□□□ 0.58
Cttnbp2nlQ99LJ0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cttnbp2nlQ99LJ0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cttnbp2nlQ99LJ0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cttnbp2nlQ99LJ0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.66■□□□□ 0.58
Cttnbp2nlQ99LJ0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cttnbp2nlQ99LJ0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cttnbp2nlQ99LJ0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.66■□□□□ 0.58
Cttnbp2nlQ99LJ0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cttnbp2nlQ99LJ0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Cttnbp2nlQ99LJ0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.66■□□□□ 0.58
Cttnbp2nlQ99LJ0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Cttnbp2nlQ99LJ0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Cttnbp2nlQ99LJ0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cttnbp2nlQ99LJ0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cttnbp2nlQ99LJ0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cttnbp2nlQ99LJ0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cttnbp2nlQ99LJ0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cttnbp2nlQ99LJ0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cttnbp2nlQ99LJ0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cttnbp2nlQ99LJ0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cttnbp2nlQ99LJ0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cttnbp2nlQ99LJ0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cttnbp2nlQ99LJ0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cttnbp2nlQ99LJ0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.65■□□□□ 0.58
Cttnbp2nlQ99LJ0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cttnbp2nlQ99LJ0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cttnbp2nlQ99LJ0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cttnbp2nlQ99LJ0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cttnbp2nlQ99LJ0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cttnbp2nlQ99LJ0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cttnbp2nlQ99LJ0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cttnbp2nlQ99LJ0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cttnbp2nlQ99LJ0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cttnbp2nlQ99LJ0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Cttnbp2nlQ99LJ0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cttnbp2nlQ99LJ0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.64■□□□□ 0.57
Cttnbp2nlQ99LJ0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms